STRINGSTRING
FFUJ_14287 FFUJ_14287 FFUJ_01694 FFUJ_01694 FFUJ_00640 FFUJ_00640 FFUJ_00399 FFUJ_00399 FFUJ_01656 FFUJ_01656 FFUJ_01325 FFUJ_01325 FFUJ_00690 FFUJ_00690 FFUJ_00916 FFUJ_00916 NAT10 NAT10 FFUJ_01004 FFUJ_01004 FFUJ_00953 FFUJ_00953 FFUJ_00883 FFUJ_00883 FFUJ_04914 FFUJ_04914 FFUJ_04735 FFUJ_04735 FFUJ_04718 FFUJ_04718 FFUJ_01289 FFUJ_01289 FFUJ_01103 FFUJ_01103 FFUJ_01367 FFUJ_01367 FFUJ_00107 FFUJ_00107 FFUJ_00712 FFUJ_00712 FFUJ_03838 FFUJ_03838 FFUJ_04937 FFUJ_04937 FFUJ_03798 FFUJ_03798 FFUJ_04944 FFUJ_04944 FFUJ_02638 FFUJ_02638 FFUJ_02649 FFUJ_02649 FFUJ_02520 FFUJ_02520 FFUJ_02567 FFUJ_02567 FFUJ_04987 FFUJ_04987 FFUJ_02874 FFUJ_02874 FFUJ_02899 FFUJ_02899 FFUJ_03044 FFUJ_03044 FFUJ_03160 FFUJ_03160 SPB1 SPB1 FFUJ_02787 FFUJ_02787 FFUJ_03260 FFUJ_03260 FFUJ_02796 FFUJ_02796 FFUJ_02815 FFUJ_02815 FFUJ_02886 FFUJ_02886 FFUJ_13264 FFUJ_13264 FFUJ_13296 FFUJ_13296 FFUJ_05103 FFUJ_05103 FFUJ_03068 FFUJ_03068 FFUJ_03079 FFUJ_03079 FFUJ_13431 FFUJ_13431 FFUJ_13679 FFUJ_13679 FFUJ_13669 FFUJ_13669 FFUJ_02739 FFUJ_02739 FFUJ_13308 FFUJ_13308 FFUJ_07178 FFUJ_07178 FFUJ_07221 FFUJ_07221 FFUJ_07477 FFUJ_07477 FFUJ_14647 FFUJ_14647 FFUJ_07573 FFUJ_07573 FFUJ_07671 FFUJ_07671 FFUJ_07970 FFUJ_07970 FFUJ_01528 FFUJ_01528 FFUJ_09860 FFUJ_09860 FFUJ_09873 FFUJ_09873 FFUJ_09464 FFUJ_09464 FFUJ_09872 FFUJ_09872 FFUJ_08302 FFUJ_08302 FFUJ_09893 FFUJ_09893 FFUJ_09815 FFUJ_09815 FFUJ_08595 FFUJ_08595 FFUJ_09789 FFUJ_09789 FFUJ_09788 FFUJ_09788 FFUJ_06297 FFUJ_06297 FFUJ_08477 FFUJ_08477 FFUJ_05869 FFUJ_05869 FFUJ_05888 FFUJ_05888 FFUJ_08685 FFUJ_08685 FFUJ_08717 FFUJ_08717 FFUJ_06072 FFUJ_06072 FFUJ_08832 FFUJ_08832 FFUJ_07414 FFUJ_07414 FFUJ_05728 FFUJ_05728 FFUJ_05867 FFUJ_05867 FFUJ_05735 FFUJ_05735 FFUJ_07534 FFUJ_07534 FFUJ_07851 FFUJ_07851 FFUJ_13352 FFUJ_13352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_14287Zn(2)-C6 fungal-type domain-containing protein. (799 aa)
FFUJ_01694Probable 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (257 aa)
FFUJ_00640Related to ATP dependent RNA helicase. (898 aa)
FFUJ_00399Related to excision repair protein RAD4. (781 aa)
FFUJ_01656Probable SOF1 protein. (445 aa)
FFUJ_01325Probable NSA2-involved in biogenesis of ribosomal large subunit. (260 aa)
FFUJ_00690Related to ATP-dependent RNA helicase ROK1. (693 aa)
FFUJ_00916Related to nuM1, hnRNP protein. (549 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1066 aa)
FFUJ_01004Related to UTP18 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA. (581 aa)
FFUJ_00953Related to rRNA-processing protein UTP23. (287 aa)
FFUJ_00883annotation not available (549 aa)
FFUJ_04914Related to bystin. (485 aa)
FFUJ_04735ATP-dependent RNA helicase DBP10. (897 aa)
FFUJ_04718Probable RIO2 protein. (406 aa)
FFUJ_01289Related to RNA 3`-terminal phosphate cyclase-like protein. (387 aa)
FFUJ_01103Related to papaya ringspot virus polyprotein. (2642 aa)
FFUJ_01367Probable RNA binding protein Rpf2 involved in ribosome biogenesis. (317 aa)
FFUJ_00107Fungal_trans domain-containing protein. (516 aa)
FFUJ_00712Related to small nucleolar ribonucleoprotein. (962 aa)
FFUJ_03838U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (268 aa)
FFUJ_04937Related to AAA family ATPase. (754 aa)
FFUJ_03798Probable pectate lyase. (231 aa)
FFUJ_04944KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (320 aa)
FFUJ_02638Probable FCF1 involved in the pre-rRNA processing steps of 40S ribosomal subunit biogenesis. (198 aa)
FFUJ_02649Related to low-temperature viability protein LTV1. (408 aa)
FFUJ_02520Related to PITSLRE protein kinase isoforms. (317 aa)
FFUJ_02567Probable periodic tryptophan protein PWP2. (894 aa)
FFUJ_04987Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (491 aa)
FFUJ_02874Related to NOP14-nuclear and nucleolar protein with possible role in ribosome biogenesis. (901 aa)
FFUJ_0289960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
FFUJ_03044Probable RPP0-acidic ribosomal protein L10.e. (361 aa)
FFUJ_03160Related to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (539 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
FFUJ_02787F-box domain-containing protein. (1216 aa)
FFUJ_03260Related to 60S ribosomal protein L24. (220 aa)
FFUJ_02796Probable DIP2-Dom34p-interacting protein. (960 aa)
FFUJ_02815Probable Nucleolar protein 9. (762 aa)
FFUJ_02886Related to rRNA-processing protein efg-1. (301 aa)
FFUJ_13264Related to UTP6-U3 snoRNP protein. (395 aa)
FFUJ_13296Probable ECM16-putative DEAH-box RNA helicase. (1209 aa)
FFUJ_05103Uncharacterized protein. (186 aa)
FFUJ_03068Related to a component of the yeast U3 snoRNP Rrp9p. (582 aa)
FFUJ_03079Related to 60S ribosomal subunit assembly/export protein LOC1. (195 aa)
FFUJ_13431Protein MAK16; Belongs to the MAK16 family. (319 aa)
FFUJ_13679Related to BUD20 Protein involved in bud-site selection. (119 aa)
FFUJ_13669Rsa3 domain-containing protein. (115 aa)
FFUJ_02739Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (199 aa)
FFUJ_13308Related to RRP15 Essential protein involved in pre-rRNA processing. (300 aa)
FFUJ_07178Probable IMP3 (Component of the U3 small nucleolar ribonucleoprotein). (183 aa)
FFUJ_07221Related to RRP7 Protein involved in pre-rRNA processing and ribosome assembly. (313 aa)
FFUJ_07477U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (712 aa)
FFUJ_14647Uncharacterized protein. (357 aa)
FFUJ_07573Related to human transcription regulator Staf-5. (645 aa)
FFUJ_07671Uncharacterized protein. (903 aa)
FFUJ_07970Probable ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (585 aa)
FFUJ_01528Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (981 aa)
FFUJ_09860Related to RNA binding protein. (373 aa)
FFUJ_09873Probable UTP7-U3 snoRNP protein. (552 aa)
FFUJ_09464Related to RRP1 protein. (239 aa)
FFUJ_09872annotation not available (816 aa)
FFUJ_08302RNA helicase. (635 aa)
FFUJ_09893Related to UTP5 protein. (392 aa)
FFUJ_09815RNA helicase. (587 aa)
FFUJ_08595Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (667 aa)
FFUJ_09789Probable BRX1 Nucleolar protein involved in the assembly of the large ribosomal subunit. (307 aa)
FFUJ_09788F-box domain-containing protein. (431 aa)
FFUJ_06297Related to P.falciparum liver stage antigen LSA-1. (883 aa)
FFUJ_08477Probable ribosomal protein S28; Belongs to the universal ribosomal protein uS12 family. (145 aa)
FFUJ_05869Related to Che-1 protein. (545 aa)
FFUJ_05888Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (319 aa)
FFUJ_08685Related to SAS10 protein, involved in silencing. (616 aa)
FFUJ_08717Related to MAK11 protein (Maintenance of killer toxin-encoding satellite M1 dsRNA). (488 aa)
FFUJ_06072Probable nucleolar protein 10. (651 aa)
FFUJ_08832RNA helicase. (795 aa)
FFUJ_07414U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (709 aa)
FFUJ_05728Related to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog. (325 aa)
FFUJ_05867Zn(2)-C6 fungal-type domain-containing protein. (1047 aa)
FFUJ_05735Uncharacterized protein. (248 aa)
FFUJ_07534Probable IMP4 protein. (298 aa)
FFUJ_07851Related to ribosomal RNA processing protein RRP5. (1791 aa)
FFUJ_13352Related to NOP16 constituent of 66S pre-ribosomal particles. (215 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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