STRINGSTRING
FFUJ_02899 FFUJ_02899 FFUJ_14647 FFUJ_14647 FFUJ_07970 FFUJ_07970 FFUJ_13352 FFUJ_13352 FFUJ_09788 FFUJ_09788 FFUJ_09789 FFUJ_09789 SPB1 SPB1 FFUJ_09815 FFUJ_09815 FFUJ_08595 FFUJ_08595 FFUJ_03260 FFUJ_03260 FFUJ_03079 FFUJ_03079 FFUJ_13431 FFUJ_13431 FFUJ_13308 FFUJ_13308 FFUJ_13679 FFUJ_13679 FFUJ_13669 FFUJ_13669 FFUJ_01528 FFUJ_01528 FFUJ_00640 FFUJ_00640 FFUJ_00399 FFUJ_00399 FFUJ_01325 FFUJ_01325 FFUJ_09860 FFUJ_09860 FFUJ_08302 FFUJ_08302 FFUJ_04735 FFUJ_04735 FFUJ_02739 FFUJ_02739 FFUJ_01367 FFUJ_01367 FFUJ_04937 FFUJ_04937
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_0289960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
FFUJ_14647Uncharacterized protein. (357 aa)
FFUJ_07970Probable ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (585 aa)
FFUJ_13352Related to NOP16 constituent of 66S pre-ribosomal particles. (215 aa)
FFUJ_09788F-box domain-containing protein. (431 aa)
FFUJ_09789Probable BRX1 Nucleolar protein involved in the assembly of the large ribosomal subunit. (307 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
FFUJ_09815RNA helicase. (587 aa)
FFUJ_08595Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (667 aa)
FFUJ_03260Related to 60S ribosomal protein L24. (220 aa)
FFUJ_03079Related to 60S ribosomal subunit assembly/export protein LOC1. (195 aa)
FFUJ_13431Protein MAK16; Belongs to the MAK16 family. (319 aa)
FFUJ_13308Related to RRP15 Essential protein involved in pre-rRNA processing. (300 aa)
FFUJ_13679Related to BUD20 Protein involved in bud-site selection. (119 aa)
FFUJ_13669Rsa3 domain-containing protein. (115 aa)
FFUJ_01528Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (981 aa)
FFUJ_00640Related to ATP dependent RNA helicase. (898 aa)
FFUJ_00399Related to excision repair protein RAD4. (781 aa)
FFUJ_01325Probable NSA2-involved in biogenesis of ribosomal large subunit. (260 aa)
FFUJ_09860Related to RNA binding protein. (373 aa)
FFUJ_08302RNA helicase. (635 aa)
FFUJ_04735ATP-dependent RNA helicase DBP10. (897 aa)
FFUJ_02739Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (199 aa)
FFUJ_01367Probable RNA binding protein Rpf2 involved in ribosome biogenesis. (317 aa)
FFUJ_04937Related to AAA family ATPase. (754 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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