Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ER | FFUJ_10347 | S0DXU0 | S0EI13 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | Polyketide synthase. | 0.496 |
| ER | FFUJ_11034 | S0DXU0 | S0EJZ8 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | Probable polyketide synthase. | 0.496 |
| ER | FFUJ_11199 | S0DXU0 | S0EJI4 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | Probable type I polyketide synthase. | 0.496 |
| ER | FFUJ_12765 | S0DXU0 | S0ED57 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | PKS_ER domain-containing protein. | 0.421 |
| ER | FFUJ_14007 | S0DXU0 | S0EHZ7 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | PKS_ER domain-containing protein. | 0.417 |
| ER | FUB1 | S0DXU0 | S0DRI1 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | Reducing polyketide synthase FUB1; Reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of fusaric acid, a mycotoxin with low to moderate toxicity to animals and humans, but with high phytotoxic properties. L-aspartate is suggested as fusaric acid amino acid precursor that is activated and further processed to O-acetyl-L-homoserine by cluster enzymes aspartate kinase FUB3 and homoserine O-acetyltransferase FUB5, as well as enzymes of the primary metabolism. The polyketide synthase (PKS) FUB1 generates the triketide trans-2-hexenal which is presumptively [...] | 0.496 |
| ER | GPY1 | S0DXU0 | S0EMV0 | Trans-enoyl reductase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is [...] | Highly reducing polyketide synthase GPY1; Highly reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of gibepyrone A, a 2H-pyran-2-one metabolite exhibiting a moderate antimicrobial activity against Gram- positive bacteria and yeasts. The highly reducing polyketide synthase GPY1 is sufficient to produce gibepyrone A. GPY1 uses an acetyl-CoA starter unit, three malonyl-CoA extender units, and two SAM-dependent methylations to establish the gibepyrone A carbon backbone, followed by product release upon intramolecular cyclization. The gibepyrone A derivat [...] | 0.496 |
| FFUJ_00028 | FFUJ_10347 | S0DPK4 | S0EI13 | Related to alcohol dehydrogenase. | Polyketide synthase. | 0.404 |
| FFUJ_00028 | FFUJ_11034 | S0DPK4 | S0EJZ8 | Related to alcohol dehydrogenase. | Probable polyketide synthase. | 0.404 |
| FFUJ_00028 | FFUJ_11199 | S0DPK4 | S0EJI4 | Related to alcohol dehydrogenase. | Probable type I polyketide synthase. | 0.408 |
| FFUJ_00028 | FUB1 | S0DPK4 | S0DRI1 | Related to alcohol dehydrogenase. | Reducing polyketide synthase FUB1; Reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of fusaric acid, a mycotoxin with low to moderate toxicity to animals and humans, but with high phytotoxic properties. L-aspartate is suggested as fusaric acid amino acid precursor that is activated and further processed to O-acetyl-L-homoserine by cluster enzymes aspartate kinase FUB3 and homoserine O-acetyltransferase FUB5, as well as enzymes of the primary metabolism. The polyketide synthase (PKS) FUB1 generates the triketide trans-2-hexenal which is presumptively [...] | 0.404 |
| FFUJ_00028 | GPY1 | S0DPK4 | S0EMV0 | Related to alcohol dehydrogenase. | Highly reducing polyketide synthase GPY1; Highly reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of gibepyrone A, a 2H-pyran-2-one metabolite exhibiting a moderate antimicrobial activity against Gram- positive bacteria and yeasts. The highly reducing polyketide synthase GPY1 is sufficient to produce gibepyrone A. GPY1 uses an acetyl-CoA starter unit, three malonyl-CoA extender units, and two SAM-dependent methylations to establish the gibepyrone A carbon backbone, followed by product release upon intramolecular cyclization. The gibepyrone A derivat [...] | 0.404 |
| FFUJ_00139 | FFUJ_10347 | S0DLE1 | S0EI13 | Related to oxidoreductase. | Polyketide synthase. | 0.404 |
| FFUJ_00139 | FFUJ_11034 | S0DLE1 | S0EJZ8 | Related to oxidoreductase. | Probable polyketide synthase. | 0.404 |
| FFUJ_00139 | FFUJ_11199 | S0DLE1 | S0EJI4 | Related to oxidoreductase. | Probable type I polyketide synthase. | 0.404 |
| FFUJ_00139 | FUB1 | S0DLE1 | S0DRI1 | Related to oxidoreductase. | Reducing polyketide synthase FUB1; Reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of fusaric acid, a mycotoxin with low to moderate toxicity to animals and humans, but with high phytotoxic properties. L-aspartate is suggested as fusaric acid amino acid precursor that is activated and further processed to O-acetyl-L-homoserine by cluster enzymes aspartate kinase FUB3 and homoserine O-acetyltransferase FUB5, as well as enzymes of the primary metabolism. The polyketide synthase (PKS) FUB1 generates the triketide trans-2-hexenal which is presumptively [...] | 0.404 |
| FFUJ_00139 | GPY1 | S0DLE1 | S0EMV0 | Related to oxidoreductase. | Highly reducing polyketide synthase GPY1; Highly reducing polyketide synthase; part of the gene cluster that mediates the biosynthesis of gibepyrone A, a 2H-pyran-2-one metabolite exhibiting a moderate antimicrobial activity against Gram- positive bacteria and yeasts. The highly reducing polyketide synthase GPY1 is sufficient to produce gibepyrone A. GPY1 uses an acetyl-CoA starter unit, three malonyl-CoA extender units, and two SAM-dependent methylations to establish the gibepyrone A carbon backbone, followed by product release upon intramolecular cyclization. The gibepyrone A derivat [...] | 0.404 |
| FFUJ_00309 | FFUJ_10347 | S0DL15 | S0EI13 | Probable Alcohol dehydrogenase. | Polyketide synthase. | 0.404 |
| FFUJ_00309 | FFUJ_11034 | S0DL15 | S0EJZ8 | Probable Alcohol dehydrogenase. | Probable polyketide synthase. | 0.404 |
| FFUJ_00309 | FFUJ_11199 | S0DL15 | S0EJI4 | Probable Alcohol dehydrogenase. | Probable type I polyketide synthase. | 0.404 |
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