STRINGSTRING
FFUJ_02130 FFUJ_02130 FFUJ_01895 FFUJ_01895 FFUJ_01704 FFUJ_01704 FFUJ_01657 FFUJ_01657 FFUJ_01314 FFUJ_01314 FFUJ_00722 FFUJ_00722 FFUJ_00711 FFUJ_00711 FFUJ_00929 FFUJ_00929 FFUJ_00832 FFUJ_00832 FFUJ_01610 FFUJ_01610 FFUJ_01400 FFUJ_01400 FFUJ_00160 FFUJ_00160 FFUJ_00251 FFUJ_00251 FFUJ_01138 FFUJ_01138 FFUJ_00732 FFUJ_00732 FFUJ_00408 FFUJ_00408 FFUJ_14407 FFUJ_14407 FFUJ_00736 FFUJ_00736 FFUJ_04892 FFUJ_04892 FFUJ_04750 FFUJ_04750 FFUJ_04544 FFUJ_04544 FFUJ_01147 FFUJ_01147 FFUJ_04602 FFUJ_04602 FFUJ_00830 FFUJ_00830 FFUJ_04152 FFUJ_04152 FFUJ_04781 FFUJ_04781 FFUJ_00242 FFUJ_00242 FFUJ_04173 FFUJ_04173 FFUJ_04606 FFUJ_04606 FFUJ_01413 FFUJ_01413 FFUJ_02570 FFUJ_02570 FFUJ_02496 FFUJ_02496 FFUJ_04133 FFUJ_04133 FFUJ_02639 FFUJ_02639 FFUJ_03914 FFUJ_03914 FFUJ_03180 FFUJ_03180 FFUJ_03253 FFUJ_03253 FFUJ_04468 FFUJ_04468 FFUJ_03289 FFUJ_03289 FFUJ_04132 FFUJ_04132 FFUJ_02576 FFUJ_02576 FFUJ_03301 FFUJ_03301 FFUJ_03478 FFUJ_03478 FFUJ_14774 FFUJ_14774 FFUJ_03053 FFUJ_03053 FFUJ_13195 FFUJ_13195 FFUJ_13221 FFUJ_13221 FFUJ_13226 FFUJ_13226 FFUJ_13280 FFUJ_13280 FFUJ_07180 FFUJ_07180 FFUJ_07329 FFUJ_07329 FFUJ_07292 FFUJ_07292 FFUJ_13190 FFUJ_13190 FFUJ_02131 FFUJ_02131 FFUJ_07672 FFUJ_07672 FFUJ_07922 FFUJ_07922 FFUJ_07929 FFUJ_07929 FFUJ_07996 FFUJ_07996 FFUJ_14376 FFUJ_14376 FFUJ_07826 FFUJ_07826 FFUJ_13499 FFUJ_13499 FFUJ_07028 FFUJ_07028 FFUJ_07881 FFUJ_07881 FFUJ_08062 FFUJ_08062 FFUJ_05423 FFUJ_05423 FFUJ_07451 FFUJ_07451 FFUJ_02575 FFUJ_02575 FFUJ_06287 FFUJ_06287 FFUJ_07827 FFUJ_07827 FFUJ_06349 FFUJ_06349 FFUJ_07093 FFUJ_07093 FFUJ_04521 FFUJ_04521 FFUJ_07280 FFUJ_07280 FFUJ_05881 FFUJ_05881 FFUJ_07370 FFUJ_07370 FFUJ_08967 FFUJ_08967 FFUJ_08655 FFUJ_08655 FFUJ_08553 FFUJ_08553 FFUJ_08248 FFUJ_08248 FFUJ_07702 FFUJ_07702 FFUJ_13897 FFUJ_13897 FFUJ_13726 FFUJ_13726 FFUJ_08341 FFUJ_08341 FFUJ_06154 FFUJ_06154 FFUJ_09122 FFUJ_09122 FFUJ_09713 FFUJ_09713 FFUJ_09731 FFUJ_09731 FFUJ_09462 FFUJ_09462 FFUJ_09996 FFUJ_09996 FFUJ_09754 FFUJ_09754 FFUJ_09769 FFUJ_09769 FFUJ_11317 FFUJ_11317
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_02130Probable retrotransposon HobS hobase. (842 aa)
FFUJ_01895Related to DNA repair protein RAD14. (382 aa)
FFUJ_01704Related to ACOB protein. (276 aa)
FFUJ_01657Probable DNA-directed RNA polymerase II chain RPB3. (340 aa)
FFUJ_01314Related to DNA-directed RNA polymerase II chain. (158 aa)
FFUJ_00722Related to RAD13. (1232 aa)
FFUJ_00711Probable DNA-directed RNA polymerase II chain RPB10. (80 aa)
FFUJ_00929Uncharacterized protein. (458 aa)
FFUJ_00832Probable replication factor C 38K chain. (352 aa)
FFUJ_01610Related to DNA repair protein MUS-42. (640 aa)
FFUJ_01400Probable replication factor protein. (382 aa)
FFUJ_00160TY3B-TY3B protein. (2189 aa)
FFUJ_00251Related to pre-mRNA splicing factor. (243 aa)
FFUJ_01138Uncharacterized protein. (697 aa)
FFUJ_00732Related to transcription elongation factor TFIIS. (309 aa)
FFUJ_00408TY2B-TY2B protein. (1617 aa)
FFUJ_14407Retrotransposon HobS hobase. (1114 aa)
FFUJ_00736DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1750 aa)
FFUJ_04892Related to UV-damaged DNA-binding protein. (1175 aa)
FFUJ_04750Probable DNA-directed RNA polymerase chain RPB5. (236 aa)
FFUJ_04544CBFD_NFYB_HMF domain-containing protein. (177 aa)
FFUJ_01147Related to COP9 signalosome subunit 4. (421 aa)
FFUJ_04602Uncharacterized protein. (350 aa)
FFUJ_00830Replication factor C subunit 1. (1045 aa)
FFUJ_04152Related to switching protein SWI10. (386 aa)
FFUJ_04781Related to single-stranded DNA binding protein 30K chain. (277 aa)
FFUJ_00242Probable COP9 complex subunit 2. (492 aa)
FFUJ_04173Related to SNF5-component of SWI/SNF transcription activator complex. (895 aa)
FFUJ_04606Related to CTI6 Cyc8-Tup1 Interacting protein. (879 aa)
FFUJ_01413Probable DNA-directed RNA polymerase II chain Rpb7. (172 aa)
FFUJ_02570Probable ubiquitin-specific processing protease 21; Belongs to the peptidase C19 family. (1182 aa)
FFUJ_02496Probable cyclin-dependent ser/thr protein kinase KIN28; Belongs to the protein kinase superfamily. (424 aa)
FFUJ_04133CIA30 domain-containing protein. (218 aa)
FFUJ_02639Probable replication factor c (40 kDa subunit). (354 aa)
FFUJ_03914Related to TFB3-TFIIH subunit (Transcription/repair factor). (363 aa)
FFUJ_03180Probable DNA helicase RAD25. (825 aa)
FFUJ_03253Uncharacterized protein. (148 aa)
FFUJ_04468Related to cop9 (Constitutive photomorphogenic), subunit 6. (418 aa)
FFUJ_03289Uncharacterized protein. (1123 aa)
FFUJ_04132BZIP domain-containing protein. (277 aa)
FFUJ_02576Retrotransposon HobS hobase. (1192 aa)
FFUJ_03301Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa)
FFUJ_03478Related to DNA-directed RNA polymerase II chain RPB9. (186 aa)
FFUJ_14774Uncharacterized protein. (1330 aa)
FFUJ_03053Related to DNA-directed RNA polymerase 13.3K chain. (136 aa)
FFUJ_13195General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (468 aa)
FFUJ_13221Related to replication factor C chain Rfc3. (392 aa)
FFUJ_13226Related to DNA polymerase delta subunit 4. (203 aa)
FFUJ_13280Related to ubiquitin carboxyl-terminal hydrolase 2; Belongs to the peptidase C19 family. (1151 aa)
FFUJ_07180Related to DNA repair protein RAD26. (1030 aa)
FFUJ_07329Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
FFUJ_07292Uncharacterized protein. (520 aa)
FFUJ_13190Related to UDP-galactopyranose mutase. (519 aa)
FFUJ_02131Uncharacterized protein. (371 aa)
FFUJ_07672Related to ELG1 protein required for S phase progression and telomere homeostasis. (1158 aa)
FFUJ_07922Related to COP9 signalosome complex subunit 1 (G protein pathway suppressor 1). (463 aa)
FFUJ_07929Related to DNA repair helicase ERCC6. (1160 aa)
FFUJ_07996DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
FFUJ_14376Uncharacterized protein. (1046 aa)
FFUJ_07826Probable COP9 signalosome subunit 5 CSN5. (340 aa)
FFUJ_13499Related to cyclophilin. (144 aa)
FFUJ_07028Uncharacterized protein. (323 aa)
FFUJ_07881Probable ring-box protein 1. (115 aa)
FFUJ_08062Retrotransposon HobS hobase. (976 aa)
FFUJ_05423BZIP domain-containing protein. (271 aa)
FFUJ_07451Related to microtubule-interacting protein. (480 aa)
FFUJ_02575Uncharacterized protein. (397 aa)
FFUJ_06287UBI4-Ubiquitin. (281 aa)
FFUJ_07827Uncharacterized protein. (925 aa)
FFUJ_06349RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (496 aa)
FFUJ_07093Probable CPR6-member of the cyclophilin family. (372 aa)
FFUJ_04521Probable retrotransposon HobS hobase. (1497 aa)
FFUJ_07280Related to COP9 signalosome complex subunit 3. (490 aa)
FFUJ_05881Probable retrotransposon HobS hobase. (916 aa)
FFUJ_07370Probable RNA polymerase II transcription factor B subunit 5. (71 aa)
FFUJ_08967Related to single-stranded DNA binding protein 12k chain. (371 aa)
FFUJ_08655Related to cullin homolog 4A; Belongs to the cullin family. (795 aa)
FFUJ_08553Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1439 aa)
FFUJ_08248Probable ubiquitin/ribosomal protein S27a fusion protein. (154 aa)
FFUJ_07702Related to non-snRNP spliceosome component (Pre-mRNA splicing protein PRP19). (477 aa)
FFUJ_13897Related to cyclin CCL1. (348 aa)
FFUJ_13726Related to retrotransposon HobS hobase. (358 aa)
FFUJ_08341Related to basic transcription factor 2 (35 kd SU). (358 aa)
FFUJ_06154Probable MUS-38 protein, involved in nucleotide excision repair. (937 aa)
FFUJ_09122Uncharacterized protein. (147 aa)
FFUJ_09713Uncharacterized protein. (447 aa)
FFUJ_09731DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
FFUJ_09462Related to DNA-directed RNA polymerase small Zn-binding chain. (72 aa)
FFUJ_09996Related to UDP-galactopyranose mutase. (507 aa)
FFUJ_09754Probable excision repair protein rhp3. (786 aa)
FFUJ_09769Related to RNA polymerase II transcription factor. (643 aa)
FFUJ_11317Related to retrotransposon HobS hobase. (539 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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