Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DA | FFUJ_00590 | S0DV66 | S0DK85 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Related to transcription factor TFIIA-L. | 0.517 |
| DA | FFUJ_00679 | S0DV66 | S0DMY4 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Related to TFIID and SAGA subunit. | 0.496 |
| DA | FFUJ_01119 | S0DV66 | S0DJ64 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Probable transcription initiation factor IIB. | 0.441 |
| DA | FFUJ_06086 | S0DV66 | S0E7X6 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Probable transcription initiation factor TFIID. | 0.519 |
| DA | FFUJ_08952 | S0DV66 | S0E7Y7 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Related to TATA-binding protein-associated-factor. | 0.523 |
| DA | FFUJ_13741 | S0DV66 | S0EC83 | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | Related to transcription initiation factor tfiid 100 kDa subunit. | 0.484 |
| FFUJ_00041 | FFUJ_00590 | S0DLK8 | S0DK85 | C2H2-type domain-containing protein. | Related to transcription factor TFIIA-L. | 0.517 |
| FFUJ_00041 | FFUJ_00679 | S0DLK8 | S0DMY4 | C2H2-type domain-containing protein. | Related to TFIID and SAGA subunit. | 0.496 |
| FFUJ_00041 | FFUJ_01119 | S0DLK8 | S0DJ64 | C2H2-type domain-containing protein. | Probable transcription initiation factor IIB. | 0.441 |
| FFUJ_00041 | FFUJ_06086 | S0DLK8 | S0E7X6 | C2H2-type domain-containing protein. | Probable transcription initiation factor TFIID. | 0.519 |
| FFUJ_00041 | FFUJ_08952 | S0DLK8 | S0E7Y7 | C2H2-type domain-containing protein. | Related to TATA-binding protein-associated-factor. | 0.523 |
| FFUJ_00041 | FFUJ_13741 | S0DLK8 | S0EC83 | C2H2-type domain-containing protein. | Related to transcription initiation factor tfiid 100 kDa subunit. | 0.484 |
| FFUJ_00478 | FFUJ_00590 | S0DQU9 | S0DK85 | Uncharacterized protein. | Related to transcription factor TFIIA-L. | 0.517 |
| FFUJ_00478 | FFUJ_00679 | S0DQU9 | S0DMY4 | Uncharacterized protein. | Related to TFIID and SAGA subunit. | 0.496 |
| FFUJ_00478 | FFUJ_01119 | S0DQU9 | S0DJ64 | Uncharacterized protein. | Probable transcription initiation factor IIB. | 0.441 |
| FFUJ_00478 | FFUJ_06086 | S0DQU9 | S0E7X6 | Uncharacterized protein. | Probable transcription initiation factor TFIID. | 0.519 |
| FFUJ_00478 | FFUJ_08952 | S0DQU9 | S0E7Y7 | Uncharacterized protein. | Related to TATA-binding protein-associated-factor. | 0.523 |
| FFUJ_00478 | FFUJ_13741 | S0DQU9 | S0EC83 | Uncharacterized protein. | Related to transcription initiation factor tfiid 100 kDa subunit. | 0.484 |
| FFUJ_00590 | DA | S0DK85 | S0DV66 | Related to transcription factor TFIIA-L. | Diels-Alderase; Hybrid PKS-NRPS synthetase; part of the gene cluster that mediates the biosynthesis of trichosetin, a trans-fused decalin- containing tetramic acid with antimicrobial activity. The PKS module of PKS-NRPS1 together with the enoylreductase (ER) catalyze the formation of the polyketide unit which is then conjugated to L-serine by the condensation domain of the PKS-NRPS1 NRPS module (By similarity). Activity of the Dieckmann cyclase domain (RED) results in release of the intermediate N-desmethylequisetin also called trichosetin (By similarity). Diels-Alderase (DA) is involv [...] | 0.517 |
| FFUJ_00590 | FFUJ_00041 | S0DK85 | S0DLK8 | Related to transcription factor TFIIA-L. | C2H2-type domain-containing protein. | 0.517 |
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