STRINGSTRING
FFUJ_08389 FFUJ_08389 FFUJ_09731 FFUJ_09731 FFUJ_09750 FFUJ_09750 FFUJ_09957 FFUJ_09957 FFUJ_08763 FFUJ_08763 FFUJ_08682 FFUJ_08682 FFUJ_07278 FFUJ_07278 FFUJ_13684 FFUJ_13684 FFUJ_03301 FFUJ_03301 FFUJ_02764 FFUJ_02764 FFUJ_04729 FFUJ_04729 FFUJ_04738 FFUJ_04738 FFUJ_04750 FFUJ_04750 FFUJ_00875 FFUJ_00875 FFUJ_00711 FFUJ_00711 FFUJ_09462 FFUJ_09462
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_08389Uncharacterized protein. (1037 aa)
FFUJ_09731DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
FFUJ_09750DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1676 aa)
FFUJ_09957Related to dna-dependent rna polymerase I subunit a43 (Rpa43). (463 aa)
FFUJ_08763DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1232 aa)
FFUJ_08682Related to DNA-directed RNA polymerase A (I) chain. (439 aa)
FFUJ_07278Related to CHD1-transcriptional regulator. (1597 aa)
FFUJ_13684SprT-like domain-containing protein. (698 aa)
FFUJ_03301Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa)
FFUJ_02764Related to RNA Polymerase I Transcription Factor Rrn3. (688 aa)
FFUJ_04729DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
FFUJ_04738SAP30_Sin3_bdg domain-containing protein. (175 aa)
FFUJ_04750Probable DNA-directed RNA polymerase chain RPB5. (236 aa)
FFUJ_00875Probable DNA-directed RNA polymerase. (381 aa)
FFUJ_00711Probable DNA-directed RNA polymerase II chain RPB10. (80 aa)
FFUJ_09462Related to DNA-directed RNA polymerase small Zn-binding chain. (72 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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