STRINGSTRING
gcvT gcvT amiF amiF AII41876.1 AII41876.1 AII41923.1 AII41923.1 purU purU AII42196.1 AII42196.1 AII42198.1 AII42198.1 AII42281.1 AII42281.1 glyA glyA AII42343.1 AII42343.1 AII42371.1 AII42371.1 AII42497.1 AII42497.1 AII42712.1 AII42712.1 rbcL rbcL AII42821.1 AII42821.1 acsA acsA AII43406.1 AII43406.1 AII43617.1 AII43617.1 AII43619.1 AII43619.1 AII44025.1 AII44025.1 AII44634.1 AII44634.1 gcvP gcvP gcvH gcvH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (368 aa)
amiFFormamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. (348 aa)
AII41876.1Formamidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (409 aa)
AII41923.1Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aconitase/IPM isomerase family. (860 aa)
purUHypothetical protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (284 aa)
AII42196.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (397 aa)
AII42198.1Glycolate oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (457 aa)
AII42281.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LDH/MDH superfamily. (355 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (429 aa)
AII42343.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (200 aa)
AII42371.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1537 aa)
AII42497.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (258 aa)
AII42712.1FAD-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (490 aa)
rbcLRibulose bisophosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (471 aa)
AII42821.1Ribulose bisphosphate carboxylase small chain; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (113 aa)
acsA3-hydroxypropionyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (657 aa)
AII43406.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (316 aa)
AII43617.1Alanine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (393 aa)
AII43619.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (473 aa)
AII44025.1Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (480 aa)
AII44634.1Citrate synthase; Catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (396 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (958 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (129 aa)
Your Current Organism:
Synechococcus sp. KORDI100
NCBI taxonomy Id: 1280380
Other names: S. sp. KORDI-100, Synechococcus sp. KORDI-100
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