Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fumC | sucD | ShL2_00995 | ShL2_01600 | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.834 |
| lpdA | pdhA | ShL2_01281 | ShL2_01730 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.985 |
| lpdA | pdhB | ShL2_01281 | ShL2_01729 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component subunit beta. | 0.971 |
| lpdA | pdhD_4 | ShL2_01281 | ShL2_01727 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.917 |
| lpdA | sucD | ShL2_01281 | ShL2_01600 | Dihydrolipoamide dehydrogenase. | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.421 |
| pdhA | lpdA | ShL2_01730 | ShL2_01281 | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | Dihydrolipoamide dehydrogenase. | 0.985 |
| pdhA | pdhB | ShL2_01730 | ShL2_01729 | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | Pyruvate dehydrogenase E1 component subunit beta. | 0.999 |
| pdhA | pdhD_4 | ShL2_01730 | ShL2_01727 | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.997 |
| pdhB | lpdA | ShL2_01729 | ShL2_01281 | Pyruvate dehydrogenase E1 component subunit beta. | Dihydrolipoamide dehydrogenase. | 0.971 |
| pdhB | pdhA | ShL2_01729 | ShL2_01730 | Pyruvate dehydrogenase E1 component subunit beta. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.999 |
| pdhB | pdhD_4 | ShL2_01729 | ShL2_01727 | Pyruvate dehydrogenase E1 component subunit beta. | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.994 |
| pdhB | sucD | ShL2_01729 | ShL2_01600 | Pyruvate dehydrogenase E1 component subunit beta. | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.426 |
| pdhD_4 | lpdA | ShL2_01727 | ShL2_01281 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Dihydrolipoamide dehydrogenase. | 0.917 |
| pdhD_4 | pdhA | ShL2_01727 | ShL2_01730 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.997 |
| pdhD_4 | pdhB | ShL2_01727 | ShL2_01729 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | Pyruvate dehydrogenase E1 component subunit beta. | 0.994 |
| pdhD_4 | sucD | ShL2_01727 | ShL2_01600 | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.421 |
| sucD | fumC | ShL2_01600 | ShL2_00995 | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.834 |
| sucD | lpdA | ShL2_01600 | ShL2_01281 | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Dihydrolipoamide dehydrogenase. | 0.421 |
| sucD | pdhB | ShL2_01600 | ShL2_01729 | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Pyruvate dehydrogenase E1 component subunit beta. | 0.426 |
| sucD | pdhD_4 | ShL2_01600 | ShL2_01727 | succinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3. | 0.421 |