(74 nodes) RNA-binding domain superfamily network (Stachybotrys chlorohalonata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TIF35	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (303 aa)
	S40285_00200	Nuclear cap-binding protein subunit 2. (180 aa)
	S40285_00234	Uncharacterized protein. (434 aa)
	S40285_07263	Uncharacterized protein. (412 aa)
	S40285_02289	RRM domain-containing protein. (881 aa)
	S40285_03040	RRM domain-containing protein. (152 aa)
	S40285_00717	RRM domain-containing protein. (310 aa)
	S40285_00747	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (560 aa)
	S40285_00693	RRM domain-containing protein. (533 aa)
	S40285_05607	RRM domain-containing protein. (375 aa)
	S40285_03405	Uncharacterized protein. (210 aa)
	S40285_03410	RRM domain-containing protein. (325 aa)
	S40285_08118	RRM domain-containing protein. (162 aa)
	S40285_02457	RRM domain-containing protein. (546 aa)
	S40285_02415	Uncharacterized protein. (362 aa)
	S40285_02437	RRM domain-containing protein. (346 aa)
	S40285_02083	RRM domain-containing protein. (384 aa)
	S40285_02085	Uncharacterized protein. (531 aa)
	S40285_01787	Uncharacterized protein. (977 aa)
	S40285_06457	RRM domain-containing protein. (380 aa)
	S40285_00551	RRM domain-containing protein. (182 aa)
	S40285_00637	RRM domain-containing protein. (141 aa)
	S40285_02604	Uncharacterized protein. (249 aa)
	S40285_05925	RRM domain-containing protein. (312 aa)
	S40285_07340	Uncharacterized protein. (491 aa)
	S40285_08246	Uncharacterized protein. (242 aa)
	S40285_05861	Uncharacterized protein. (435 aa)
	S40285_06943	Uncharacterized protein. (728 aa)
	S40285_02628	Uncharacterized protein. (744 aa)
	S40285_01580	Uncharacterized protein. (621 aa)
	S40285_01546	Uncharacterized protein. (391 aa)
	S40285_03546	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (463 aa)
	S40285_05956	Uncharacterized protein. (1416 aa)
	S40285_00525	RRM domain-containing protein. (576 aa)
	S40285_00474	Uncharacterized protein. (746 aa)
	S40285_02699	RRM domain-containing protein. (287 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (747 aa)
	S40285_01375	Uncharacterized protein. (775 aa)
	S40285_01397	RRM domain-containing protein. (496 aa)
	S40285_07137	Uncharacterized protein. (488 aa)
	S40285_01050	RRM domain-containing protein. (355 aa)
	S40285_00873	YTH domain-containing protein. (622 aa)
	S40285_02013	Uncharacterized protein. (574 aa)
	S40285_00394	Uncharacterized protein. (446 aa)
	S40285_02212	RRM domain-containing protein. (875 aa)
	S40285_06357	Uncharacterized protein. (309 aa)
	S40285_00382	Uncharacterized protein. (476 aa)
	S40285_00380	Uncharacterized protein. (346 aa)
	S40285_00296	Uncharacterized protein. (1169 aa)
	S40285_00355	Uncharacterized protein. (786 aa)
	S40285_07783	Uncharacterized protein. (385 aa)
	S40285_03276	RRM domain-containing protein. (203 aa)
	S40285_03795	RRM domain-containing protein. (192 aa)
	S40285_03789	Uncharacterized protein. (419 aa)
	S40285_05028	Uncharacterized protein. (399 aa)
	S40285_07556	RRM domain-containing protein. (336 aa)
	S40285_00928	RRM domain-containing protein. (313 aa)
	S40285_02839	Uncharacterized protein. (556 aa)
	S40285_06368	RRM domain-containing protein. (641 aa)
	S40285_05848	Uncharacterized protein. (419 aa)
	S40285_06983	Uncharacterized protein. (369 aa)
	S40285_04287	Uncharacterized protein. (701 aa)
	S40285_09978	Uncharacterized protein. (156 aa)
	S40285_02401	Uncharacterized protein. (511 aa)
	S40285_04795	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (750 aa)
	S40285_06023	Uncharacterized protein. (834 aa)
	S40285_03240	Uncharacterized protein. (836 aa)
	S40285_00434	RRM domain-containing protein. (609 aa)
	S40285_04862	RRM domain-containing protein. (259 aa)
	S40285_06688	SAP domain-containing protein. (633 aa)
	S40285_06684	Uncharacterized protein. (399 aa)
	S40285_07754	RNA-dependent RNA polymerase. (1273 aa)
	S40285_04749	RRM domain-containing protein. (195 aa)
	S40285_04730	Uncharacterized protein. (1071 aa)

Your Current Organism:

Stachybotrys chlorohalonata

NCBI taxonomy Id: 1283841
Other names: S. chlorohalonata IBT 40285, Stachybotrys chlorohalonata IBT 40285

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PRT1	S40285_00234	A0A084QM79	A0A084QU48	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_00355	A0A084QM79	A0A084QHJ3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_00382	A0A084QM79	A0A084QHW2	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_00394	A0A084QM79	A0A084QHW9	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_00525	A0A084QM79	A0A084QNC4	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.922
PRT1	S40285_00551	A0A084QM79	A0A084R2I8	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.596
PRT1	S40285_00693	A0A084QM79	A0A084QR90	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.561
PRT1	S40285_01397	A0A084QM79	A0A084QLD0	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.501
PRT1	S40285_02085	A0A084QM79	A0A084R1A5	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.606
PRT1	S40285_02289	A0A084QM79	A0A084QSH1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.501
PRT1	S40285_02415	A0A084QM79	A0A084R0R4	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_02437	A0A084QM79	A0A084R0S3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.501
PRT1	S40285_02457	A0A084QM79	A0A084R0Q3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.501
PRT1	S40285_04287	A0A084QM79	A0A084QQ66	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_04795	A0A084QM79	A0A084QP18	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.748
PRT1	S40285_05028	A0A084QM79	A0A084QFI8	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_05848	A0A084QM79	A0A084QES3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.518
PRT1	S40285_05861	A0A084QM79	A0A084QBL4	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_06684	A0A084QM79	A0A084QA23	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501
PRT1	S40285_07263	A0A084QM79	A0A084QSW7	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.501