Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJC95965.1 | korA | SHYC_06125 | SHYC_07930 | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
| AJC95965.1 | korB | SHYC_06125 | SHYC_07925 | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| AJC95965.1 | ldh-1 | SHYC_06125 | SHYC_00455 | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.927 |
| AJC95965.1 | ldh-2 | SHYC_06125 | SHYC_05820 | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.927 |
| AJC95965.1 | pyc | SHYC_06125 | SHYC_08740 | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.940 |
| korA | AJC95965.1 | SHYC_07930 | SHYC_06125 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
| korA | korB | SHYC_07930 | SHYC_07925 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| korA | ldh-1 | SHYC_07930 | SHYC_00455 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.961 |
| korA | ldh-2 | SHYC_07930 | SHYC_05820 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.961 |
| korA | pyc | SHYC_07930 | SHYC_08740 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.943 |
| korB | AJC95965.1 | SHYC_07925 | SHYC_06125 | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| korB | korA | SHYC_07925 | SHYC_07930 | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| korB | ldh-1 | SHYC_07925 | SHYC_00455 | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.926 |
| korB | ldh-2 | SHYC_07925 | SHYC_05820 | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.926 |
| korB | pyc | SHYC_07925 | SHYC_08740 | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.916 |
| ldh-1 | AJC95965.1 | SHYC_00455 | SHYC_06125 | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
| ldh-1 | korA | SHYC_00455 | SHYC_07930 | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.961 |
| ldh-1 | korB | SHYC_00455 | SHYC_07925 | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 2-oxoacid ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| ldh-1 | ldh-2 | SHYC_00455 | SHYC_05820 | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.920 |
| ldh-1 | pyc | SHYC_00455 | SHYC_08740 | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.924 |
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