(29 nodes) Proteasome complex network (Neofusicoccum parvum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCRNP2_10345	Proteasome subunit alpha type. (245 aa)
	UCRNP2_8050	Putative proteasome component c5 protein. (266 aa)
	UCRNP2_7299	Putative 26s proteasome non-atpase regulatory subunit 11 protein. (425 aa)
	UCRNP2_7261	Putative 26s proteasome non-atpase regulatory subunit 12 protein. (492 aa)
	UCRNP2_7307	Putative proteasome regulatory particle subunit protein. (276 aa)
	UCRNP2_2419	Putative 26s protease regulatory subunit s10b protein; Belongs to the AAA ATPase family. (375 aa)
	UCRNP2_8052	Proteasome subunit beta; Belongs to the peptidase T1B family. (278 aa)
	UCRNP2_7588	Proteasome subunit alpha type. (294 aa)
	UCRNP2_10421	Proteasome subunit alpha type. (245 aa)
	UCRNP2_6309	Putative 26s protease regulatory subunit 8 protein; Belongs to the AAA ATPase family. (389 aa)
	UCRNP2_5152	Putative proteasome subunit beta type 7 protein. (275 aa)
	UCRNP2_5085	Putative 26s protease regulatory subunit 6b protein; Belongs to the AAA ATPase family. (419 aa)
	UCRNP2_8566	Proteasome subunit alpha type. (278 aa)
	UCRNP2_8238	Putative proteasome regulatory particle subunit protein. (387 aa)
	UCRNP2_5630	Proteasome subunit beta. (229 aa)
	UCRNP2_2113	Proteasome subunit beta. (205 aa)
	UCRNP2_5196	Proteasome subunit beta. (284 aa)
	UCRNP2_7469	Proteasome subunit alpha type. (254 aa)
	UCRNP2_4758	Putative proteasome regulatory particle subunit protein. (331 aa)
	UCRNP2_1005	Putative 26s proteasome regulatory subunit rpn-8 protein. (361 aa)
	UCRNP2_5234	Proteasome subunit beta. (205 aa)
	UCRNP2_2765	Putative 26s proteasome regulatory subunit s5a protein. (306 aa)
	UCRNP2_4120	Putative 26s protease regulatory subunit 6a protein; Belongs to the AAA ATPase family. (462 aa)
	UCRNP2_3985	Proteasome subunit alpha type. (259 aa)
	UCRNP2_3522	Putative 26s protease regulatory subunit 4 protein; Belongs to the AAA ATPase family. (463 aa)
	UCRNP2_1032	Putative 26s protease regulatory subunit 7 protein; Belongs to the AAA ATPase family. (439 aa)
	UCRNP2_878	Ubiquitin carboxyl-terminal hydrolase. (595 aa)
	UCRNP2_609	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1163 aa)
	UCRNP2_191	Proteasome subunit alpha type. (268 aa)

Your Current Organism:

Neofusicoccum parvum

NCBI taxonomy Id: 1287680
Other names: N. parvum UCRNP2, Neofusicoccum parvum UCRNP2

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCRNP2_1005	UCRNP2_1032	R1GKK1	R1GV37	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit 7 protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_10345	R1GKK1	R1E5J5	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit alpha type.	0.999
UCRNP2_1005	UCRNP2_10421	R1GKK1	R1G427	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit alpha type.	0.998
UCRNP2_1005	UCRNP2_191	R1GKK1	R1GXD2	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit alpha type.	0.997
UCRNP2_1005	UCRNP2_2113	R1GKK1	R1GHI0	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit beta.	0.996
UCRNP2_1005	UCRNP2_2419	R1GKK1	R1ESI5	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit s10b protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_2765	R1GKK1	R1GQE4	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s proteasome regulatory subunit s5a protein.	0.999
UCRNP2_1005	UCRNP2_3522	R1GKK1	R1GUF0	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit 4 protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_3985	R1GKK1	R1GT64	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit alpha type.	0.999
UCRNP2_1005	UCRNP2_4120	R1GKK1	R1GSU7	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit 6a protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_4758	R1GKK1	R1GJH5	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative proteasome regulatory particle subunit protein.	0.999
UCRNP2_1005	UCRNP2_5085	R1GKK1	R1G9B4	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit 6b protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_5152	R1GKK1	R1G9B0	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative proteasome subunit beta type 7 protein.	0.999
UCRNP2_1005	UCRNP2_5196	R1GKK1	R1GID8	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit beta.	0.987
UCRNP2_1005	UCRNP2_5234	R1GKK1	R1GQ20	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit beta.	0.998
UCRNP2_1005	UCRNP2_5630	R1GKK1	R1GH44	Putative 26s proteasome regulatory subunit rpn-8 protein.	Proteasome subunit beta.	0.991
UCRNP2_1005	UCRNP2_609	R1GKK1	R1GW39	Putative 26s proteasome regulatory subunit rpn-8 protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
UCRNP2_1005	UCRNP2_6309	R1GKK1	R1G673	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s protease regulatory subunit 8 protein; Belongs to the AAA ATPase family.	0.999
UCRNP2_1005	UCRNP2_7261	R1GKK1	R1EE52	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s proteasome non-atpase regulatory subunit 12 protein.	0.999
UCRNP2_1005	UCRNP2_7299	R1GKK1	R1EE28	Putative 26s proteasome regulatory subunit rpn-8 protein.	Putative 26s proteasome non-atpase regulatory subunit 11 protein.	0.999