STRINGSTRING
UCRNP2_534 UCRNP2_534 UCRNP2_4758 UCRNP2_4758 UCRNP2_1005 UCRNP2_1005 UCRNP2_9009 UCRNP2_9009
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UCRNP2_534Putative cop9 signalosome subunit 6 protein. (467 aa)
UCRNP2_4758Putative proteasome regulatory particle subunit protein. (331 aa)
UCRNP2_1005Putative 26s proteasome regulatory subunit rpn-8 protein. (361 aa)
UCRNP2_9009Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (352 aa)
Your Current Organism:
Neofusicoccum parvum
NCBI taxonomy Id: 1287680
Other names: N. parvum UCRNP2, Neofusicoccum parvum UCRNP2
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