STRINGSTRING
UCREL1_11348 UCREL1_11348 UCREL1_3929 UCREL1_3929 UCREL1_5049 UCREL1_5049 UCREL1_1685 UCREL1_1685 UCREL1_425 UCREL1_425 UCREL1_5806 UCREL1_5806 UCREL1_426 UCREL1_426
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UCREL1_11348Splicing factor subunit; Belongs to the SF3B5 family. (95 aa)
UCREL1_3929Putative pre-mrna-splicing factor rse-1 protein. (1181 aa)
UCREL1_5049Putative pre-mrna splicing factor ini1 protein. (109 aa)
UCREL1_1685Putative splicing factor 3b subunit 4 protein. (395 aa)
UCREL1_425Putative pre-mrna branch site protein p14 protein. (120 aa)
UCREL1_5806Putative splicing factor 3b subunit 2 protein. (616 aa)
UCREL1_426Putative u2 snrnp component prp10 protein. (1218 aa)
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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