STRINGSTRING
UCREL1_10882 UCREL1_10882 UCREL1_10696 UCREL1_10696 CLP1 CLP1 UCREL1_7298 UCREL1_7298 UCREL1_7281 UCREL1_7281 UCREL1_5882 UCREL1_5882 UCREL1_4464 UCREL1_4464 UCREL1_2880 UCREL1_2880 UCREL1_2517 UCREL1_2517 UCREL1_1859 UCREL1_1859 UCREL1_2073 UCREL1_2073 UCREL1_1200 UCREL1_1200 UCREL1_6689 UCREL1_6689 UCREL1_6317 UCREL1_6317 UCREL1_3502 UCREL1_3502 UCREL1_6500 UCREL1_6500 UCREL1_4955 UCREL1_4955 UCREL1_4841 UCREL1_4841 UCREL1_1201 UCREL1_1201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UCREL1_10882Putative duf455 domain-containing protein. (690 aa)
UCREL1_10696Putative metallo-beta-lactamase superfamily protein. (895 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (557 aa)
UCREL1_7298Putative retinoblastoma-binding protein. (622 aa)
UCREL1_7281Putative pre-mrna polyadenylation factor fip1 protein. (318 aa)
UCREL1_5882Cleavage and polyadenylation specificity factor subunit 2. (594 aa)
UCREL1_4464Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (625 aa)
UCREL1_2880Putative zinc finger ccch type domain containing protein. (262 aa)
UCREL1_2517Putative wd repeat containing protein 82 protein. (500 aa)
UCREL1_1859Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
UCREL1_2073Putative mrna 3-end-processing protein rna-14 protein. (805 aa)
UCREL1_1200Cleavage factor two protein 1 protein. (718 aa)
UCREL1_6689Uncharacterized protein. (645 aa)
UCREL1_6317Putative cleavage and polyadenylation specificity factor subunit 5 protein. (266 aa)
UCREL1_3502Putative cleavage stimulation factor 64-kDa subunit protein. (324 aa)
UCREL1_6500Putative mrna cleavage factor complex component pcf11 protein. (231 aa)
UCREL1_4955Cleavage and polyadenylation specificity factor subunit 2. (300 aa)
UCREL1_4841Uncharacterized protein. (258 aa)
UCREL1_1201Putative cpsf a subunit region protein. (470 aa)
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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