Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| UCREL1_10362 | UCREL1_1039 | M7T7S8 | M7TPS3 | Putative mediated genome instability protein rmi1 protein. | Putative dna repair protein. | 0.856 |
| UCREL1_10362 | UCREL1_11560 | M7T7S8 | M7SV97 | Putative mediated genome instability protein rmi1 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.821 |
| UCREL1_10362 | UCREL1_154 | M7T7S8 | M7T1G6 | Putative mediated genome instability protein rmi1 protein. | Checkpoint protein; Belongs to the HUS1 family. | 0.471 |
| UCREL1_10362 | UCREL1_2153 | M7T7S8 | M7T2L6 | Putative mediated genome instability protein rmi1 protein. | DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. | 0.662 |
| UCREL1_10362 | UCREL1_2635 | M7T7S8 | M7TUG7 | Putative mediated genome instability protein rmi1 protein. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.596 |
| UCREL1_10362 | UCREL1_2636 | M7T7S8 | M7T1A2 | Putative mediated genome instability protein rmi1 protein. | Uncharacterized protein. | 0.596 |
| UCREL1_10362 | UCREL1_373 | M7T7S8 | M7T0Y7 | Putative mediated genome instability protein rmi1 protein. | Putative 3-5 exonuclease protein. | 0.991 |
| UCREL1_10362 | UCREL1_3846 | M7T7S8 | M7SRS6 | Putative mediated genome instability protein rmi1 protein. | Uncharacterized protein. | 0.911 |
| UCREL1_10362 | UCREL1_445 | M7T7S8 | M7T769 | Putative mediated genome instability protein rmi1 protein. | Putative p-loop containing nucleoside triphosphate hydrolase protein. | 0.695 |
| UCREL1_10362 | UCREL1_4484 | M7T7S8 | M7SVG0 | Putative mediated genome instability protein rmi1 protein. | Putative signal transducer protein. | 0.586 |
| UCREL1_10362 | UCREL1_4621 | M7T7S8 | M7TEL2 | Putative mediated genome instability protein rmi1 protein. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.948 |
| UCREL1_10362 | UCREL1_512 | M7T7S8 | M7T0L1 | Putative mediated genome instability protein rmi1 protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.838 |
| UCREL1_10362 | UCREL1_5409 | M7T7S8 | M7TLJ1 | Putative mediated genome instability protein rmi1 protein. | Putative rad50 protein. | 0.829 |
| UCREL1_10362 | UCREL1_5429 | M7T7S8 | M7SSU4 | Putative mediated genome instability protein rmi1 protein. | Uncharacterized protein. | 0.821 |
| UCREL1_10362 | UCREL1_5676 | M7T7S8 | M7TKR6 | Putative mediated genome instability protein rmi1 protein. | Putative ataxia telangiectasia mutated protein; Belongs to the PI3/PI4-kinase family. | 0.699 |
| UCREL1_10362 | UCREL1_6622 | M7T7S8 | M7SPJ1 | Putative mediated genome instability protein rmi1 protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.911 |
| UCREL1_10362 | UCREL1_7028 | M7T7S8 | M7TGX8 | Putative mediated genome instability protein rmi1 protein. | Putative replication protein a 32 kDa subunit protein. | 0.817 |
| UCREL1_10362 | UCREL1_7531 | M7T7S8 | M7TFJ2 | Putative mediated genome instability protein rmi1 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.821 |
| UCREL1_10362 | UCREL1_7726 | M7T7S8 | M7SGB5 | Putative mediated genome instability protein rmi1 protein. | Putative dna repair and recombination protein rad54 protein. | 0.612 |
| UCREL1_10362 | UCREL1_8056 | M7T7S8 | M7SKU0 | Putative mediated genome instability protein rmi1 protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.921 |
page 1 of 29