10 items (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCREL1_6038	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (362 aa)
	UCREL1_6266	Putative mrc1-like domain-containing protein. (1425 aa)
	UCREL1_3925	Putative cell division control protein. (529 aa)
	UCREL1_154	Checkpoint protein; Belongs to the HUS1 family. (352 aa)
	UCREL1_2153	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (385 aa)
	UCREL1_10018	Putative cell cycle checkpoint protein rad17 protein. (399 aa)
	UCREL1_8700	Uncharacterized protein. (149 aa)
	UCREL1_3385	Putative zinc finger protein 830-like protein. (413 aa)
	UCREL1_6217	Putative brct domain-containing protein. (1032 aa)
	UCREL1_7543	Cell division control protein; Belongs to the CDC6/cdc18 family. (455 aa)

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10018	UCREL1_154	M7T8R3	M7T1G6	Putative cell cycle checkpoint protein rad17 protein.	Checkpoint protein; Belongs to the HUS1 family.	0.978
UCREL1_10018	UCREL1_2153	M7T8R3	M7T2L6	Putative cell cycle checkpoint protein rad17 protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.996
UCREL1_10018	UCREL1_6038	M7T8R3	M7TJQ0	Putative cell cycle checkpoint protein rad17 protein.	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.738
UCREL1_10018	UCREL1_6217	M7T8R3	M7TJA8	Putative cell cycle checkpoint protein rad17 protein.	Putative brct domain-containing protein.	0.888
UCREL1_10018	UCREL1_6266	M7T8R3	M7SK65	Putative cell cycle checkpoint protein rad17 protein.	Putative mrc1-like domain-containing protein.	0.747
UCREL1_10018	UCREL1_7543	M7T8R3	M7SM64	Putative cell cycle checkpoint protein rad17 protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.482
UCREL1_10018	UCREL1_8700	M7T8R3	M7TCF4	Putative cell cycle checkpoint protein rad17 protein.	Uncharacterized protein.	0.970
UCREL1_154	UCREL1_10018	M7T1G6	M7T8R3	Checkpoint protein; Belongs to the HUS1 family.	Putative cell cycle checkpoint protein rad17 protein.	0.978
UCREL1_154	UCREL1_2153	M7T1G6	M7T2L6	Checkpoint protein; Belongs to the HUS1 family.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.989
UCREL1_154	UCREL1_6038	M7T1G6	M7TJQ0	Checkpoint protein; Belongs to the HUS1 family.	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.544
UCREL1_154	UCREL1_6217	M7T1G6	M7TJA8	Checkpoint protein; Belongs to the HUS1 family.	Putative brct domain-containing protein.	0.732
UCREL1_2153	UCREL1_10018	M7T2L6	M7T8R3	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Putative cell cycle checkpoint protein rad17 protein.	0.996
UCREL1_2153	UCREL1_154	M7T2L6	M7T1G6	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Checkpoint protein; Belongs to the HUS1 family.	0.989
UCREL1_2153	UCREL1_3925	M7T2L6	M7SWX9	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Putative cell division control protein.	0.431
UCREL1_2153	UCREL1_6038	M7T2L6	M7TJQ0	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.726
UCREL1_2153	UCREL1_6217	M7T2L6	M7TJA8	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Putative brct domain-containing protein.	0.988
UCREL1_2153	UCREL1_6266	M7T2L6	M7SK65	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Putative mrc1-like domain-containing protein.	0.684
UCREL1_2153	UCREL1_8700	M7T2L6	M7TCF4	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	Uncharacterized protein.	0.971
UCREL1_3925	UCREL1_2153	M7SWX9	M7T2L6	Putative cell division control protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.431
UCREL1_3925	UCREL1_6038	M7SWX9	M7TJQ0	Putative cell division control protein.	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.557