(11 nodes) RNA polymerase II general transcription initiation factor activity network (Eutypa lata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCREL1_11678	Putative tata-box-binding protein. (260 aa)
	UCREL1_11549	Putative bromodomain associated domain-containing protein. (307 aa)
	UCREL1_8459	Putative transcription initiation factor tfiid subunit 1 protein. (1146 aa)
	UCREL1_8231	Putative dna polymerase epsilon subunit c protein. (129 aa)
	UCREL1_11109	Putative taf6-like protein. (460 aa)
	UCREL1_3651	Putative u2 small nuclear ribonucleoprotein a protein. (109 aa)
	UCREL1_3509	Putative rna polymerase ii transcription factor siii subunit a protein. (503 aa)
	UCREL1_9307	Putative transcription initiation factor iif subunit alpha protein. (684 aa)
	UCREL1_9289	Putative transcription initiation factor iib protein. (358 aa)
	UCREL1_1459	Putative rna polymerase i and iii transcription factor complex component protein. (281 aa)
	UCREL1_2469	Putative transcription initiation factor iie subunit beta protein. (331 aa)

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_11109	UCREL1_11549	M7SWI7	M7SBI4	Putative taf6-like protein.	Putative bromodomain associated domain-containing protein.	0.999
UCREL1_11109	UCREL1_11678	M7SWI7	M7SUW5	Putative taf6-like protein.	Putative tata-box-binding protein.	0.971
UCREL1_11109	UCREL1_1459	M7SWI7	M7TNL4	Putative taf6-like protein.	Putative rna polymerase i and iii transcription factor complex component protein.	0.971
UCREL1_11109	UCREL1_2469	M7SWI7	M7TV02	Putative taf6-like protein.	Putative transcription initiation factor iie subunit beta protein.	0.852
UCREL1_11109	UCREL1_3651	M7SWI7	M7SXQ9	Putative taf6-like protein.	Putative u2 small nuclear ribonucleoprotein a protein.	0.737
UCREL1_11109	UCREL1_8459	M7SWI7	M7SJT1	Putative taf6-like protein.	Putative transcription initiation factor tfiid subunit 1 protein.	0.999
UCREL1_11109	UCREL1_9289	M7SWI7	M7TAT4	Putative taf6-like protein.	Putative transcription initiation factor iib protein.	0.932
UCREL1_11109	UCREL1_9307	M7SWI7	M7TAP4	Putative taf6-like protein.	Putative transcription initiation factor iif subunit alpha protein.	0.854
UCREL1_11549	UCREL1_11109	M7SBI4	M7SWI7	Putative bromodomain associated domain-containing protein.	Putative taf6-like protein.	0.999
UCREL1_11549	UCREL1_11678	M7SBI4	M7SUW5	Putative bromodomain associated domain-containing protein.	Putative tata-box-binding protein.	0.964
UCREL1_11549	UCREL1_1459	M7SBI4	M7TNL4	Putative bromodomain associated domain-containing protein.	Putative rna polymerase i and iii transcription factor complex component protein.	0.964
UCREL1_11549	UCREL1_2469	M7SBI4	M7TV02	Putative bromodomain associated domain-containing protein.	Putative transcription initiation factor iie subunit beta protein.	0.877
UCREL1_11549	UCREL1_3651	M7SBI4	M7SXQ9	Putative bromodomain associated domain-containing protein.	Putative u2 small nuclear ribonucleoprotein a protein.	0.796
UCREL1_11549	UCREL1_8459	M7SBI4	M7SJT1	Putative bromodomain associated domain-containing protein.	Putative transcription initiation factor tfiid subunit 1 protein.	0.996
UCREL1_11549	UCREL1_9289	M7SBI4	M7TAT4	Putative bromodomain associated domain-containing protein.	Putative transcription initiation factor iib protein.	0.850
UCREL1_11549	UCREL1_9307	M7SBI4	M7TAP4	Putative bromodomain associated domain-containing protein.	Putative transcription initiation factor iif subunit alpha protein.	0.810
UCREL1_11678	UCREL1_11109	M7SUW5	M7SWI7	Putative tata-box-binding protein.	Putative taf6-like protein.	0.971
UCREL1_11678	UCREL1_11549	M7SUW5	M7SBI4	Putative tata-box-binding protein.	Putative bromodomain associated domain-containing protein.	0.964
UCREL1_11678	UCREL1_1459	M7SUW5	M7TNL4	Putative tata-box-binding protein.	Putative rna polymerase i and iii transcription factor complex component protein.	0.902
UCREL1_11678	UCREL1_2469	M7SUW5	M7TV02	Putative tata-box-binding protein.	Putative transcription initiation factor iie subunit beta protein.	0.933