STRINGSTRING
HCR1 HCR1 UCREL1_11619 UCREL1_11619 UCREL1_11382 UCREL1_11382 UCREL1_11303 UCREL1_11303 UCREL1_11225 UCREL1_11225 UCREL1_11248 UCREL1_11248 UCREL1_11102 UCREL1_11102 UCREL1_10724 UCREL1_10724 UCREL1_10691 UCREL1_10691 TIF34 TIF34 UCREL1_11649 UCREL1_11649 UCREL1_11626 UCREL1_11626 UCREL1_9163 UCREL1_9163 UCREL1_8927 UCREL1_8927 UCREL1_10791 UCREL1_10791 UCREL1_10546 UCREL1_10546 UCREL1_8301 UCREL1_8301 UCREL1_10308 UCREL1_10308 UCREL1_10311 UCREL1_10311 UCREL1_10270 UCREL1_10270 UCREL1_7960 UCREL1_7960 UCREL1_9891 UCREL1_9891 UCREL1_7398 UCREL1_7398 UCREL1_7361 UCREL1_7361 UCREL1_7323 UCREL1_7323 UCREL1_7302 UCREL1_7302 UCREL1_9323 UCREL1_9323 TIF35 TIF35 UCREL1_6457 UCREL1_6457 UCREL1_5788 UCREL1_5788 NIP1 NIP1 UCREL1_7743 UCREL1_7743 PRT1 PRT1 UCREL1_5584 UCREL1_5584 UCREL1_5453 UCREL1_5453 UCREL1_7646 UCREL1_7646 UCREL1_7208 UCREL1_7208 UCREL1_7433 UCREL1_7433 UCREL1_6863 UCREL1_6863 UCREL1_4820 UCREL1_4820 UCREL1_5348 UCREL1_5348 UCREL1_5094 UCREL1_5094 UCREL1_5273 UCREL1_5273 UCREL1_5163 UCREL1_5163 UCREL1_4843 UCREL1_4843 UCREL1_5049 UCREL1_5049 UCREL1_4657 UCREL1_4657 UCREL1_11655 UCREL1_11655 TIF32 TIF32 UCREL1_2398 UCREL1_2398 UCREL1_4276 UCREL1_4276 UCREL1_11011 UCREL1_11011 UCREL1_4165 UCREL1_4165 UCREL1_10968 UCREL1_10968 UCREL1_10955 UCREL1_10955 UCREL1_3778 UCREL1_3778 UCREL1_10541 UCREL1_10541 UCREL1_1028 UCREL1_1028 UCREL1_3067 UCREL1_3067 UCREL1_2694 UCREL1_2694 UCREL1_2682 UCREL1_2682 UCREL1_561 UCREL1_561 UCREL1_2719 UCREL1_2719 UCREL1_2378 UCREL1_2378 UCREL1_9151 UCREL1_9151 RPS0 RPS0 UCREL1_2199 UCREL1_2199 UCREL1_8944 UCREL1_8944 UCREL1_2017 UCREL1_2017 UCREL1_8634 UCREL1_8634 UCREL1_1821 UCREL1_1821 UCREL1_1349 UCREL1_1349 UCREL1_1571 UCREL1_1571 UCREL1_1263 UCREL1_1263 UCREL1_8343 UCREL1_8343 UCREL1_8311 UCREL1_8311 UCREL1_8294 UCREL1_8294 UCREL1_1130 UCREL1_1130 UCREL1_11507 UCREL1_11507 UCREL1_11245 UCREL1_11245 UCREL1_817 UCREL1_817 UCREL1_11157 UCREL1_11157 UCREL1_11100 UCREL1_11100 UCREL1_11043 UCREL1_11043 UCREL1_7677 UCREL1_7677 UCREL1_849 UCREL1_849 UCREL1_10870 UCREL1_10870 UCREL1_531 UCREL1_531 UCREL1_768 UCREL1_768 UCREL1_535 UCREL1_535 UCREL1_530 UCREL1_530 UCREL1_7397 UCREL1_7397 UCREL1_353 UCREL1_353 UCREL1_10401 UCREL1_10401 UCREL1_7 UCREL1_7 UCREL1_10101 UCREL1_10101 UCREL1_9916 UCREL1_9916 UCREL1_6317 UCREL1_6317 UCREL1_5712 UCREL1_5712 INT6 INT6 UCREL1_4737 UCREL1_4737 UCREL1_7817 UCREL1_7817 UCREL1_7720 UCREL1_7720 UCREL1_4302 UCREL1_4302 UCREL1_3995 UCREL1_3995 UCREL1_7157 UCREL1_7157 UCREL1_3755 UCREL1_3755 UCREL1_6890 UCREL1_6890 UCREL1_3455 UCREL1_3455 UCREL1_3159 UCREL1_3159 UCREL1_6353 UCREL1_6353 UCREL1_5806 UCREL1_5806 UCREL1_2521 UCREL1_2521 UCREL1_5023 UCREL1_5023 UCREL1_1822 UCREL1_1822 UCREL1_4924 UCREL1_4924 UCREL1_1111 UCREL1_1111 UCREL1_953 UCREL1_953 UCREL1_614 UCREL1_614 UCREL1_3685 UCREL1_3685 LSM4 LSM4 UCREL1_3020 UCREL1_3020 UCREL1_2519 UCREL1_2519 UCREL1_2238 UCREL1_2238 UCREL1_2146 UCREL1_2146 UCREL1_2026 UCREL1_2026 UCREL1_775 UCREL1_775 UCREL1_593 UCREL1_593 UCREL1_471 UCREL1_471 UCREL1_426 UCREL1_426
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
HCR1Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (284 aa)
UCREL1_11619Putative 40s ribosomal protein s14 protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
UCREL1_11382Uncharacterized protein. (212 aa)
UCREL1_11303Putative-like family protein. (289 aa)
UCREL1_11225Putative pre-mrna-splicing factor atp-dependent rna helicase prp16 protein. (980 aa)
UCREL1_11248Putative eukaryotic translation initiation factor 2 subunit gamma protein. (510 aa)
UCREL1_11102Protein kinase domain-containing protein. (484 aa)
UCREL1_10724Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (396 aa)
UCREL1_10691Putative hit zinc finger protein. (269 aa)
TIF34Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
UCREL1_11649Putative midasin protein. (1810 aa)
UCREL1_11626Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (475 aa)
UCREL1_9163Putative u1 snrnp splicing complex subunit protein. (297 aa)
UCREL1_8927Putative translation initiation factor 4b protein. (624 aa)
UCREL1_10791Putative wd domain-containing protein. (376 aa)
UCREL1_10546Uncharacterized protein. (846 aa)
UCREL1_8301Putative u2 snrnp component ist3 protein. (341 aa)
UCREL1_10308Putative rrna biogenesis protein rrp5 protein. (1807 aa)
UCREL1_10311Putative aar2 protein. (575 aa)
UCREL1_10270Putative nucleolar gtp-binding protein. (667 aa)
UCREL1_7960U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (228 aa)
UCREL1_9891Putative rna polymerase rpb4 protein. (144 aa)
UCREL1_7398Putative f-box domain-containing protein. (397 aa)
UCREL1_7361Protein kinase domain-containing protein. (583 aa)
UCREL1_7323Putative meiotic recombination protein dmc1 protein. (313 aa)
UCREL1_7302Putative gtp-binding protein. (284 aa)
UCREL1_9323Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (436 aa)
TIF35Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (298 aa)
UCREL1_6457Putative zinc fyve domain containing protein. (423 aa)
UCREL1_5788Putative nuclear protein ataxin-7 protein. (413 aa)
NIP1Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (867 aa)
UCREL1_7743Putative mrna splicing factor (Prp1 zer1) protein. (930 aa)
PRT1Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (744 aa)
UCREL1_5584Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (363 aa)
UCREL1_5453Small nuclear ribonucleoprotein Sm D2. (114 aa)
UCREL1_7646Putative pre-mrna-splicing factor isy1 protein. (255 aa)
UCREL1_7208Putative rna-binding protein rbm25 protein. (764 aa)
UCREL1_7433Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (240 aa)
UCREL1_6863Putative 30s ribosomal protein s7 protein. (148 aa)
UCREL1_4820Putative kh domain-containing protein. (439 aa)
UCREL1_5348Putative nad-binding protein. (309 aa)
UCREL1_5094Putative 116 kDa u5 small nuclear ribonucleoprotein component protein. (997 aa)
UCREL1_5273Putative wd repeat-containing protein. (449 aa)
UCREL1_5163Putative 60s ribosomal protein l5 protein. (136 aa)
UCREL1_4843Putative serine protein kinase protein. (261 aa)
UCREL1_5049Putative pre-mrna splicing factor ini1 protein. (109 aa)
UCREL1_4657Putative caib baif family enzyme protein. (608 aa)
UCREL1_11655Putative serine protein. (258 aa)
TIF32Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1064 aa)
UCREL1_2398Putative cell cycle control protein cwf16 protein. (240 aa)
UCREL1_4276Putative cenp-o kinetochore centromere component protein. (314 aa)
UCREL1_11011Putative pre-mrna-processing factor 39 protein. (589 aa)
UCREL1_4165Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (574 aa)
UCREL1_10968Uncharacterized protein. (429 aa)
UCREL1_1095560S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
UCREL1_3778Putative gu4 nucleic-binding protein. (419 aa)
UCREL1_10541Uncharacterized protein. (427 aa)
UCREL1_1028Putative zinc finger (Hit type) family protein. (209 aa)
UCREL1_3067Putative extracellular salicylate hydroxylase monooxygenase protein. (107 aa)
UCREL1_2694Putative u4 tri-snrnp-associated protein 2 protein. (563 aa)
UCREL1_2682Putative splicing factor 3a subunit protein. (250 aa)
UCREL1_561Putative nuclear fragile x mental retardation-interacting protein 1 protein. (508 aa)
UCREL1_2719Putative prp18 domain-containing protein. (375 aa)
UCREL1_237860S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (161 aa)
UCREL1_9151Putative splicing factor spf30 protein. (853 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
UCREL1_2199Putative eukaryotic translation initiation factor 5 protein. (436 aa)
UCREL1_8944Putative eukaryotic translation initiation factor 1a protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (161 aa)
UCREL1_2017Putative 40s ribosomal protein s27 protein. (82 aa)
UCREL1_8634Putative cmgc srpk protein kinase protein. (530 aa)
UCREL1_1821Putative cell cycle control protein. (680 aa)
UCREL1_1349Putative rna polymerase ii-associated protein. (426 aa)
UCREL1_1571Putative cmgc protein kinase protein; Belongs to the protein kinase superfamily. (351 aa)
UCREL1_1263Uncharacterized protein. (396 aa)
UCREL1_8343Putative sfrs protein kinase 3 protein. (321 aa)
UCREL1_8311Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (261 aa)
UCREL1_8294Uncharacterized protein. (126 aa)
UCREL1_1130Putative gpi anchored cell wall protein. (163 aa)
UCREL1_11507Putative sec63 brl domain-containing protein. (2223 aa)
UCREL1_11245Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (434 aa)
UCREL1_817Putative serine protein kinase protein. (271 aa)
UCREL1_11157Putative 40s ribosomal protein s5 protein; Belongs to the universal ribosomal protein uS7 family. (212 aa)
UCREL1_11100Putative-like family protein. (294 aa)
UCREL1_11043Protein kinase domain-containing protein. (675 aa)
UCREL1_7677Putative mitochondrial ribosomal protein s19 protein; Belongs to the universal ribosomal protein uS19 family. (106 aa)
UCREL1_849Putative pre-mrna splicing factor cwc2 protein. (393 aa)
UCREL1_10870Uncharacterized protein. (210 aa)
UCREL1_531Putative duf866 domain-containing protein. (136 aa)
UCREL1_768Putative-like family protein. (311 aa)
UCREL1_535Putative 60s ribosomal protein l25 protein. (154 aa)
UCREL1_530Putative small nuclear ribonucleo protein. (89 aa)
UCREL1_7397Putative ribosome biogenesis protein brx1 protein. (319 aa)
UCREL1_353Putative ribosome biogenesis protein sqt1 protein. (522 aa)
UCREL1_10401Putative ribosome biogenesis protein ssf1 protein. (509 aa)
UCREL1_7Protein kinase domain-containing protein. (445 aa)
UCREL1_10101Putative isoflavone reductase family protein. (308 aa)
UCREL1_9916Putative pre-mrna-processing factor 17 protein. (533 aa)
UCREL1_6317Putative cleavage and polyadenylation specificity factor subunit 5 protein. (266 aa)
UCREL1_5712Putative 60s ribosomal protein l10 protein. (220 aa)
INT6Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (432 aa)
UCREL1_4737Putative caib baif family enzyme protein. (714 aa)
UCREL1_7817Putative u4 u6 snrna-associated-splicing factor prp24 protein. (1099 aa)
UCREL1_7720Putative ribosome assembly protein 3 protein. (93 aa)
UCREL1_4302Putative rna polymerase 2 transcription elongation factor protein. (620 aa)
UCREL1_3995Putative 60s ribosomal protein l38 protein; Belongs to the eukaryotic ribosomal protein eL38 family. (82 aa)
UCREL1_7157Uncharacterized protein. (368 aa)
UCREL1_3755Putative eukaryotic translation initiation factor 2 beta subunit protein. (341 aa)
UCREL1_6890Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
UCREL1_3455Putative brix domain-containing protein. (317 aa)
UCREL1_3159Putative serine threonine-protein kinase protein; Belongs to the protein kinase superfamily. (411 aa)
UCREL1_6353Putative topoisomerase ii protein. (828 aa)
UCREL1_5806Putative splicing factor 3b subunit 2 protein. (616 aa)
UCREL1_2521Putative pre-mrna processing splicing factor 8 protein. (2504 aa)
UCREL1_5023Putative mitochondrial ribosomal protein subunit s18 protein. (168 aa)
UCREL1_1822Putative prp31 c terminal domain-containing protein. (615 aa)
UCREL1_4924Putative atp-dependent rna helicase dhx8 protein. (956 aa)
UCREL1_1111Putative snornp assembly factor protein. (627 aa)
UCREL1_953Putative rna recognition domain-containing protein. (852 aa)
UCREL1_614Putative 40s ribosomal protein s15 protein; Belongs to the universal ribosomal protein uS19 family. (154 aa)
UCREL1_3685Putative 40s ribosomal protein s28 protein. (68 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (147 aa)
UCREL1_3020Uncharacterized protein. (362 aa)
UCREL1_2519Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (217 aa)
UCREL1_2238Putative-like protein. (283 aa)
UCREL1_2146Putative 40s ribosomal protein s19 protein. (151 aa)
UCREL1_2026Small nuclear ribonucleoprotein G. (100 aa)
UCREL1_775Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (651 aa)
UCREL1_593Putative 60s ribosomal protein l6 protein. (200 aa)
UCREL1_471Putative periodic tryptophan protein 2 protein. (865 aa)
UCREL1_426Putative u2 snrnp component prp10 protein. (1218 aa)
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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