(30 nodes) SWI/SNF superfamily-type complex network (Eutypa lata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCREL1_10100	Putative transcription initiation factor tfiid subunit 14 protein. (295 aa)
	UCREL1_11675	Putative rsc complex subunit rsc9 protein. (971 aa)
	UCREL1_11638	Putative hmg box protein. (314 aa)
	UCREL1_11031	Putative yl1 nuclear protein. (212 aa)
	UCREL1_11080	Uncharacterized protein. (193 aa)
	UCREL1_11033	Putative chromatin remodeling complex subunit protein; Belongs to the actin family. (435 aa)
	UCREL1_9438	Putative chromatin structure-remodeling complex protein rsc7 protein. (400 aa)
	UCREL1_9241	Putative papa-1-like conserved region family protein. (421 aa)
	UCREL1_6356	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (488 aa)
	UCREL1_8180	Putative rsc complex subunit protein. (538 aa)
	UCREL1_7828	Putative yl1 nuclear protein. (416 aa)
	UCREL1_7052	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)
	UCREL1_4871	Putative helicase swr-1 protein. (1280 aa)
	UCREL1_3679	Putative chromatin remodeling complex subunit protein; Belongs to the actin family. (811 aa)
	UCREL1_4383	Putative chromatin structure-remodeling complex protein rsc7 protein. (474 aa)
	UCREL1_3101	Putative ino80 chromatin remodeling complex ies1 protein. (670 aa)
	UCREL1_10119	Putative chromatin remodelling complex atpase chain isw1 protein. (1123 aa)
	UCREL1_2401	Putative rsc complex subunit protein. (804 aa)
	UCREL1_8854	Putative swi snf complex protein. (470 aa)
	UCREL1_1177	Putative swi snf and rsc complex subunit ssr4 protein. (479 aa)
	UCREL1_7559	Uncharacterized protein. (834 aa)
	UCREL1_7490	Putative snf5-like protein. (511 aa)
	UCREL1_7001	Putative duf1711 domain protein. (269 aa)
	UCREL1_8919	Putative snf2-family atp dependent chromatin remodeling factor snf21 protein. (1439 aa)
	UCREL1_5109	Uncharacterized protein. (213 aa)
	UCREL1_7421	Putative actin-like protein arp-6 protein; Belongs to the actin family. (469 aa)
	UCREL1_3368	Putative yeats family protein. (357 aa)
	UCREL1_6184	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (754 aa)
	UCREL1_5949	Putative ino80-like protein. (1444 aa)
	UCREL1_3334	Putative swi snf complex protein. (691 aa)

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10100	UCREL1_11031	M7SFK4	M7S7G4	Putative transcription initiation factor tfiid subunit 14 protein.	Putative yl1 nuclear protein.	0.559
UCREL1_10100	UCREL1_11638	M7SFK4	M7S5U9	Putative transcription initiation factor tfiid subunit 14 protein.	Putative hmg box protein.	0.434
UCREL1_10100	UCREL1_3101	M7SFK4	M7SZ83	Putative transcription initiation factor tfiid subunit 14 protein.	Putative ino80 chromatin remodeling complex ies1 protein.	0.411
UCREL1_10100	UCREL1_3334	M7SFK4	M7TSN5	Putative transcription initiation factor tfiid subunit 14 protein.	Putative swi snf complex protein.	0.555
UCREL1_10100	UCREL1_3368	M7SFK4	M7TI70	Putative transcription initiation factor tfiid subunit 14 protein.	Putative yeats family protein.	0.500
UCREL1_10100	UCREL1_3679	M7SFK4	M7SS38	Putative transcription initiation factor tfiid subunit 14 protein.	Putative chromatin remodeling complex subunit protein; Belongs to the actin family.	0.624
UCREL1_10100	UCREL1_4383	M7SFK4	M7SVQ3	Putative transcription initiation factor tfiid subunit 14 protein.	Putative chromatin structure-remodeling complex protein rsc7 protein.	0.449
UCREL1_10100	UCREL1_4871	M7SFK4	M7SNY8	Putative transcription initiation factor tfiid subunit 14 protein.	Putative helicase swr-1 protein.	0.485
UCREL1_10100	UCREL1_5949	M7SFK4	M7TK15	Putative transcription initiation factor tfiid subunit 14 protein.	Putative ino80-like protein.	0.701
UCREL1_10100	UCREL1_6184	M7SFK4	M7TJ79	Putative transcription initiation factor tfiid subunit 14 protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.435
UCREL1_10100	UCREL1_6356	M7SFK4	M7SJZ3	Putative transcription initiation factor tfiid subunit 14 protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.682
UCREL1_10100	UCREL1_7052	M7SFK4	M7SNG4	Putative transcription initiation factor tfiid subunit 14 protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.755
UCREL1_10100	UCREL1_7490	M7SFK4	M7T6T8	Putative transcription initiation factor tfiid subunit 14 protein.	Putative snf5-like protein.	0.810
UCREL1_10100	UCREL1_7828	M7SFK4	M7SLE8	Putative transcription initiation factor tfiid subunit 14 protein.	Putative yl1 nuclear protein.	0.595
UCREL1_10100	UCREL1_8180	M7SFK4	M7SKX4	Putative transcription initiation factor tfiid subunit 14 protein.	Putative rsc complex subunit protein.	0.403
UCREL1_10100	UCREL1_8854	M7SFK4	M7T2Z6	Putative transcription initiation factor tfiid subunit 14 protein.	Putative swi snf complex protein.	0.575
UCREL1_10100	UCREL1_8919	M7SFK4	M7TBV1	Putative transcription initiation factor tfiid subunit 14 protein.	Putative snf2-family atp dependent chromatin remodeling factor snf21 protein.	0.839
UCREL1_10119	UCREL1_11031	M7SZC3	M7S7G4	Putative chromatin remodelling complex atpase chain isw1 protein.	Putative yl1 nuclear protein.	0.408
UCREL1_10119	UCREL1_11033	M7SZC3	M7SCY4	Putative chromatin remodelling complex atpase chain isw1 protein.	Putative chromatin remodeling complex subunit protein; Belongs to the actin family.	0.494
UCREL1_10119	UCREL1_11638	M7SZC3	M7S5U9	Putative chromatin remodelling complex atpase chain isw1 protein.	Putative hmg box protein.	0.538