(14 nodes) Type 1 protein exporter network (Eutypa lata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCREL1_11097	Putative multidrug resistance protein. (1381 aa)
	UCREL1_9188	Putative abc transporter protein. (1282 aa)
	UCREL1_901	Putative multidrug resistance protein 3 (P glycoprotein 3) protein. (1248 aa)
	UCREL1_10284	Putative leptomycin b resistance protein pmd1 protein. (1332 aa)
	UCREL1_9986	Putative leptomycin b resistance protein pmd1 protein. (1355 aa)
	UCREL1_7410	Putative heavy metal tolerance protein. (672 aa)
	UCREL1_8977	Putative abc transporter protein. (1212 aa)
	UCREL1_5324	Putative abc transporter protein. (699 aa)
	UCREL1_5569	Putative atp-dependent permease mdl2 protein. (679 aa)
	UCREL1_10250	Putative spermidine putrescine import atp-binding protein pota protein. (343 aa)
	UCREL1_1614	Putative heavy metal tolerance protein. (788 aa)
	UCREL1_534	Putative heavy metal tolerance protein. (379 aa)
	UCREL1_3071	Putative abc multidrug transporter protein. (1372 aa)
	UCREL1_5182	Putative iron-sulfur clusters transporter atm1 protein. (737 aa)

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10250	UCREL1_1614	M7SYY9	M7T427	Putative spermidine putrescine import atp-binding protein pota protein.	Putative heavy metal tolerance protein.	0.684
UCREL1_10250	UCREL1_5182	M7SYY9	M7TM68	Putative spermidine putrescine import atp-binding protein pota protein.	Putative iron-sulfur clusters transporter atm1 protein.	0.569
UCREL1_10250	UCREL1_5324	M7SYY9	M7SMR4	Putative spermidine putrescine import atp-binding protein pota protein.	Putative abc transporter protein.	0.566
UCREL1_10250	UCREL1_534	M7SYY9	M7T686	Putative spermidine putrescine import atp-binding protein pota protein.	Putative heavy metal tolerance protein.	0.913
UCREL1_10250	UCREL1_7410	M7SYY9	M7SH70	Putative spermidine putrescine import atp-binding protein pota protein.	Putative heavy metal tolerance protein.	0.473
UCREL1_1614	UCREL1_10250	M7T427	M7SYY9	Putative heavy metal tolerance protein.	Putative spermidine putrescine import atp-binding protein pota protein.	0.684
UCREL1_5182	UCREL1_10250	M7TM68	M7SYY9	Putative iron-sulfur clusters transporter atm1 protein.	Putative spermidine putrescine import atp-binding protein pota protein.	0.569
UCREL1_5182	UCREL1_5569	M7TM68	M7SSF2	Putative iron-sulfur clusters transporter atm1 protein.	Putative atp-dependent permease mdl2 protein.	0.678
UCREL1_5324	UCREL1_10250	M7SMR4	M7SYY9	Putative abc transporter protein.	Putative spermidine putrescine import atp-binding protein pota protein.	0.566
UCREL1_534	UCREL1_10250	M7T686	M7SYY9	Putative heavy metal tolerance protein.	Putative spermidine putrescine import atp-binding protein pota protein.	0.913
UCREL1_5569	UCREL1_5182	M7SSF2	M7TM68	Putative atp-dependent permease mdl2 protein.	Putative iron-sulfur clusters transporter atm1 protein.	0.678
UCREL1_7410	UCREL1_10250	M7SH70	M7SYY9	Putative heavy metal tolerance protein.	Putative spermidine putrescine import atp-binding protein pota protein.	0.473