15 items (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UCREL1_4621	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (555 aa)
	UCREL1_8700	Uncharacterized protein. (149 aa)
	UCREL1_10362	Putative mediated genome instability protein rmi1 protein. (295 aa)
	UCREL1_2636	Uncharacterized protein. (290 aa)
	UCREL1_5888	Putative l-ascorbic acid binding protein. (386 aa)
	UCREL1_8548	Putative rad52 dna repair protein radc protein. (240 aa)
	UCREL1_8056	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (621 aa)
	UCREL1_3846	Uncharacterized protein. (384 aa)
	UCREL1_5429	Uncharacterized protein. (112 aa)
	UCREL1_11560	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (488 aa)
	UCREL1_4326	Putative atp-dependent dna helicase recq protein. (807 aa)
	UCREL1_373	Putative 3-5 exonuclease protein. (303 aa)
	UCREL1_2635	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1407 aa)
	UCREL1_6217	Putative brct domain-containing protein. (1032 aa)
	UCREL1_7531	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (821 aa)

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10362	UCREL1_11560	M7T7S8	M7SV97	Putative mediated genome instability protein rmi1 protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.821
UCREL1_10362	UCREL1_2635	M7T7S8	M7TUG7	Putative mediated genome instability protein rmi1 protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.596
UCREL1_10362	UCREL1_2636	M7T7S8	M7T1A2	Putative mediated genome instability protein rmi1 protein.	Uncharacterized protein.	0.596
UCREL1_10362	UCREL1_373	M7T7S8	M7T0Y7	Putative mediated genome instability protein rmi1 protein.	Putative 3-5 exonuclease protein.	0.991
UCREL1_10362	UCREL1_3846	M7T7S8	M7SRS6	Putative mediated genome instability protein rmi1 protein.	Uncharacterized protein.	0.911
UCREL1_10362	UCREL1_4326	M7T7S8	M7SVY2	Putative mediated genome instability protein rmi1 protein.	Putative atp-dependent dna helicase recq protein.	0.821
UCREL1_10362	UCREL1_4621	M7T7S8	M7TEL2	Putative mediated genome instability protein rmi1 protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.948
UCREL1_10362	UCREL1_5429	M7T7S8	M7SSU4	Putative mediated genome instability protein rmi1 protein.	Uncharacterized protein.	0.821
UCREL1_10362	UCREL1_5888	M7T7S8	M7TB86	Putative mediated genome instability protein rmi1 protein.	Putative l-ascorbic acid binding protein.	0.911
UCREL1_10362	UCREL1_6217	M7T7S8	M7TJA8	Putative mediated genome instability protein rmi1 protein.	Putative brct domain-containing protein.	0.720
UCREL1_10362	UCREL1_7531	M7T7S8	M7TFJ2	Putative mediated genome instability protein rmi1 protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.821
UCREL1_10362	UCREL1_8056	M7T7S8	M7SKU0	Putative mediated genome instability protein rmi1 protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.921
UCREL1_10362	UCREL1_8548	M7T7S8	M7SJX1	Putative mediated genome instability protein rmi1 protein.	Putative rad52 dna repair protein radc protein.	0.861
UCREL1_10362	UCREL1_8700	M7T7S8	M7TCF4	Putative mediated genome instability protein rmi1 protein.	Uncharacterized protein.	0.471
UCREL1_11560	UCREL1_10362	M7SV97	M7T7S8	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Putative mediated genome instability protein rmi1 protein.	0.821
UCREL1_11560	UCREL1_2635	M7SV97	M7TUG7	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.827
UCREL1_11560	UCREL1_2636	M7SV97	M7T1A2	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.634
UCREL1_11560	UCREL1_373	M7SV97	M7T0Y7	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Putative 3-5 exonuclease protein.	0.431
UCREL1_11560	UCREL1_3846	M7SV97	M7SRS6	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.653
UCREL1_11560	UCREL1_4621	M7SV97	M7TEL2	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.900