STRINGSTRING
DVJ83_02115 DVJ83_02115 DVJ83_02025 DVJ83_02025 DVJ83_01910 DVJ83_01910 gyrA gyrA DVJ83_11740 DVJ83_11740 trpF trpF GCA_000348665_00815 GCA_000348665_00815 GCA_000348665_00821 GCA_000348665_00821 GCA_000348665_00858 GCA_000348665_00858 DVJ83_14130 DVJ83_14130 DVJ83_14135 DVJ83_14135 deoB deoB DVJ83_05235 DVJ83_05235 DVJ83_05300 DVJ83_05300 DVJ83_05395 DVJ83_05395 tig tig DVJ83_02185 DVJ83_02185 DVJ83_10145 DVJ83_10145 rpe rpe trpC trpC DVJ83_12490 DVJ83_12490 DVJ83_12665 DVJ83_12665 DVJ83_07590 DVJ83_07590 GCA_000348665_01810 GCA_000348665_01810 GCA_000348665_01838 GCA_000348665_01838 GCA_000348665_01845 GCA_000348665_01845 DVJ83_11490 DVJ83_11490 DVJ83_14230 DVJ83_14230 fni fni hisA hisA glmM glmM truD truD purE purE apgM apgM galE galE groL groL GCA_000348665_02389 GCA_000348665_02389 aroF aroF hemL hemL DVJ83_01210 DVJ83_01210 treS treS DVJ83_06020 DVJ83_06020 DVJ83_05940 DVJ83_05940 DVJ83_05630 DVJ83_05630 DVJ83_13490 DVJ83_13490 DVJ83_13485 DVJ83_13485 DVJ83_02390 DVJ83_02390 pgi pgi DVJ83_02850 DVJ83_02850 DVJ83_03605 DVJ83_03605 nnrE nnrE topA topA tpiA tpiA GCA_000348665_00167 GCA_000348665_00167 DVJ83_04010 DVJ83_04010 truB truB rpiA rpiA DVJ83_06810 DVJ83_06810 DVJ83_06755 DVJ83_06755 DVJ83_06425 DVJ83_06425 murI murI DVJ83_10540 DVJ83_10540 glf glf truA truA menC menC DVJ83_01260 DVJ83_01260 alr alr DVJ83_02970 DVJ83_02970 DVJ83_12315 DVJ83_12315 queA queA treY treY DVJ83_03230 DVJ83_03230
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DVJ83_02115Unannotated protein. (333 aa)
DVJ83_02025Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (361 aa)
DVJ83_01910Unannotated protein. (326 aa)
gyrAUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (814 aa)
DVJ83_11740Unannotated protein. (128 aa)
trpFUnannotated protein; Belongs to the TrpF family. (199 aa)
GCA_000348665_00815Unannotated protein. (716 aa)
GCA_000348665_00821Unannotated protein. (850 aa)
GCA_000348665_00858Unannotated protein. (87 aa)
DVJ83_14130Unannotated protein. (203 aa)
DVJ83_14135Unannotated protein. (146 aa)
deoBUnannotated protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (388 aa)
DVJ83_05235Unannotated protein. (550 aa)
DVJ83_05300Unannotated protein. (288 aa)
DVJ83_05395Unannotated protein. (289 aa)
tigUnannotated protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (446 aa)
DVJ83_02185Unannotated protein. (109 aa)
DVJ83_10145Unannotated protein. (158 aa)
rpeUnannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. (223 aa)
trpCUnannotated protein; Belongs to the TrpC family. (268 aa)
DVJ83_12490Unannotated protein. (360 aa)
DVJ83_12665Unannotated protein. (544 aa)
DVJ83_07590Unannotated protein. (303 aa)
GCA_000348665_01810Unannotated protein. (230 aa)
GCA_000348665_01838Unannotated protein. (372 aa)
GCA_000348665_01845Unannotated protein. (336 aa)
DVJ83_11490Unannotated protein. (659 aa)
DVJ83_14230Unannotated protein. (482 aa)
fniUnannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (333 aa)
hisAUnannotated protein. (242 aa)
glmMUnannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (444 aa)
truDUnannotated protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (392 aa)
purEUnannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (161 aa)
apgMUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (410 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
groLUnannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (548 aa)
GCA_000348665_02389Unannotated protein. (170 aa)
aroFUnannotated protein. (366 aa)
hemLUnannotated protein. (444 aa)
DVJ83_01210Unannotated protein. (142 aa)
treSUnannotated protein. (552 aa)
DVJ83_06020Unannotated protein. (122 aa)
DVJ83_05940Unannotated protein. (325 aa)
DVJ83_05630Unannotated protein. (250 aa)
DVJ83_13490Unannotated protein. (262 aa)
DVJ83_13485Unannotated protein. (128 aa)
DVJ83_02390Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (322 aa)
pgiUnannotated protein; Belongs to the GPI family. (539 aa)
DVJ83_02850Unannotated protein. (336 aa)
DVJ83_03605Unannotated protein. (696 aa)
nnrEUnannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] (495 aa)
topAUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (980 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (245 aa)
GCA_000348665_00167Unannotated protein. (227 aa)
DVJ83_04010Unannotated protein. (293 aa)
truBUnannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (308 aa)
rpiAUnannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (226 aa)
DVJ83_06810Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (257 aa)
DVJ83_06755Unannotated protein. (682 aa)
DVJ83_06425Unannotated protein. (250 aa)
murIUnannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis. (264 aa)
DVJ83_10540Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (251 aa)
glfUnannotated protein. (380 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (290 aa)
menCUnannotated protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (375 aa)
DVJ83_01260Unannotated protein. (141 aa)
alrUnannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (351 aa)
DVJ83_02970Unannotated protein. (705 aa)
DVJ83_12315Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (193 aa)
queAUnannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (354 aa)
treYUnannotated protein. (956 aa)
DVJ83_03230Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (381 aa)
Your Current Organism:
Deinococcus wulumuqiensis
NCBI taxonomy Id: 1288484
Other names: D. wulumuqiensis R12, Deinococcus wulumuqiensis DSM 28115, Deinococcus wulumuqiensis R12
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