STRINGSTRING
pckA pckA tpiA tpiA gap gap ppsA ppsA pgi pgi DVJ83_11990 DVJ83_11990 pfkA pfkA sdaAB sdaAB DVJ83_07590 DVJ83_07590 GCA_000348665_01828 GCA_000348665_01828 GCA_000348665_01845 GCA_000348665_01845 zwf zwf DVJ83_10325 DVJ83_10325 glpX glpX galE galE sdaAA sdaAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pckAUnannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (531 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (245 aa)
gapUnannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (330 aa)
ppsAUnannotated protein; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (780 aa)
pgiUnannotated protein; Belongs to the GPI family. (539 aa)
DVJ83_11990Unannotated protein. (283 aa)
pfkAUnannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (334 aa)
sdaABUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (221 aa)
DVJ83_07590Unannotated protein. (303 aa)
GCA_000348665_01828Unannotated protein. (836 aa)
GCA_000348665_01845Unannotated protein. (336 aa)
zwfUnannotated protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (547 aa)
DVJ83_10325Unannotated protein. (192 aa)
glpXUnannotated protein. (332 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
sdaAAUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (299 aa)
Your Current Organism:
Deinococcus wulumuqiensis
NCBI taxonomy Id: 1288484
Other names: D. wulumuqiensis R12, Deinococcus wulumuqiensis DSM 28115, Deinococcus wulumuqiensis R12
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