Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCQ72739.1 | gcvH | MGMAQ_0782 | MGMAQ_0784 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| CCQ72739.1 | gcvPA | MGMAQ_0782 | MGMAQ_0783 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| CCQ72739.1 | gcvT | MGMAQ_0782 | MGMAQ_0785 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. | 0.999 |
| CCQ72739.1 | gdh | MGMAQ_0782 | MGMAQ_0103 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | NAD-glutamate dehydrogenase; Function of strongly homologous gene; enzyme. | 0.827 |
| CCQ72739.1 | glnA | MGMAQ_0782 | MGMAQ_1827 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.844 |
| CCQ72739.1 | gltD | MGMAQ_0782 | MGMAQ_0098 | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glutamate synthase, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.800 |
| gcvH | CCQ72739.1 | MGMAQ_0784 | MGMAQ_0782 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
| gcvH | gcvPA | MGMAQ_0784 | MGMAQ_0783 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| gcvH | gcvT | MGMAQ_0784 | MGMAQ_0785 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. | 0.999 |
| gcvH | gdh | MGMAQ_0784 | MGMAQ_0103 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | NAD-glutamate dehydrogenase; Function of strongly homologous gene; enzyme. | 0.800 |
| gcvH | glnA | MGMAQ_0784 | MGMAQ_1827 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.832 |
| gcvH | gltD | MGMAQ_0784 | MGMAQ_0098 | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glutamate synthase, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.800 |
| gcvPA | CCQ72739.1 | MGMAQ_0783 | MGMAQ_0782 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
| gcvPA | gcvH | MGMAQ_0783 | MGMAQ_0784 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| gcvPA | gcvT | MGMAQ_0783 | MGMAQ_0785 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. | 0.999 |
| gcvPA | gdh | MGMAQ_0783 | MGMAQ_0103 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | NAD-glutamate dehydrogenase; Function of strongly homologous gene; enzyme. | 0.827 |
| gcvPA | glnA | MGMAQ_0783 | MGMAQ_1827 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.841 |
| gcvPA | gltD | MGMAQ_0783 | MGMAQ_0098 | Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glutamate synthase, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.800 |
| gcvT | CCQ72739.1 | MGMAQ_0785 | MGMAQ_0782 | Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. | Putative glycine dehydrogenase [decarboxylating] subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.999 |
| gcvT | gcvH | MGMAQ_0785 | MGMAQ_0784 | Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. | Glycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
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