STRINGSTRING
BcDW1_2409 BcDW1_2409 BcDW1_1956 BcDW1_1956 BcDW1_797 BcDW1_797 BcDW1_9234 BcDW1_9234 BcDW1_812 BcDW1_812 BcDW1_2410 BcDW1_2410 BcDW1_10574 BcDW1_10574 BcDW1_2261 BcDW1_2261 BcDW1_4770 BcDW1_4770 BcDW1_2442 BcDW1_2442 BcDW1_3344 BcDW1_3344 BcDW1_6561 BcDW1_6561 BcDW1_7118 BcDW1_7118 BcDW1_7664 BcDW1_7664 BcDW1_5567 BcDW1_5567 BcDW1_6450 BcDW1_6450 BcDW1_9704 BcDW1_9704 BcDW1_10014 BcDW1_10014 BcDW1_10260 BcDW1_10260 BcDW1_10295 BcDW1_10295 BcDW1_8711 BcDW1_8711 BcDW1_9431 BcDW1_9431 BcDW1_8977 BcDW1_8977 BcDW1_1754 BcDW1_1754 BcDW1_10536 BcDW1_10536 BcDW1_10323 BcDW1_10323 BcDW1_5664 BcDW1_5664 BcDW1_7624 BcDW1_7624 BcDW1_7246 BcDW1_7246
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BcDW1_2409Putative snf2 family domain-containing protein. (1638 aa)
BcDW1_1956Putative dna helicase ino-80 protein. (1764 aa)
BcDW1_797Putative histone h1-binding protein. (493 aa)
BcDW1_9234Histone H2B; Belongs to the histone H2B family. (140 aa)
BcDW1_812RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)
BcDW1_2410Uncharacterized protein. (595 aa)
BcDW1_10574Putative actin-like protein arp-6 protein; Belongs to the actin family. (446 aa)
BcDW1_2261Uncharacterized protein. (200 aa)
BcDW1_4770Putative histone h1 protein. (229 aa)
BcDW1_2442Putative papa-1-like conserved region family protein. (426 aa)
BcDW1_3344Histone H2A; Belongs to the histone H2A family. (143 aa)
BcDW1_6561Putative nucleosome assembly protein; Belongs to the nucleosome assembly protein (NAP) family. (398 aa)
BcDW1_7118Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (138 aa)
BcDW1_7664Putative chromatin assembly factor 1 subunit protein. (706 aa)
BcDW1_5567Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (280 aa)
BcDW1_6450Putative nap family protein; Belongs to the nucleosome assembly protein (NAP) family. (327 aa)
BcDW1_9704Putative chromodomain helicase protein. (1513 aa)
BcDW1_10014Putative swr1-complex protein 4 protein. (608 aa)
BcDW1_10260Putative helicase swr1 protein. (1607 aa)
BcDW1_10295Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1407 aa)
BcDW1_8711Putative aaa family protein. (1696 aa)
BcDW1_9431FK506-binding protein. (470 aa)
BcDW1_8977Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
BcDW1_1754Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
BcDW1_10536Putative yl1 nuclear protein. (701 aa)
BcDW1_10323FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (576 aa)
BcDW1_5664Putative transcriptional repressor tup1 protein. (676 aa)
BcDW1_7624Putative mis6 domain-containing protein. (682 aa)
BcDW1_7246Putative chromatin assembly factor 1 subunit b protein. (738 aa)
Your Current Organism:
Botrytis cinerea BcDW1
NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1
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