(27 nodes) SCF ubiquitin ligase complex network (Botrytis cinerea BcDW1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BcDW1_1702	Putative f-box domain-containing protein. (703 aa)
	BcDW1_3158	Putative f-box wd-40 repeat-containing protein. (843 aa)
	BcDW1_10304	Putative scf e3 ubiquitin ligase complex f-box protein grra protein. (619 aa)
	BcDW1_1560	Putative bax-like protein. (290 aa)
	BcDW1_4776	Putative ubiquitin conjugating enzyme protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	BcDW1_5350	Putative carotenoid oxygenase protein. (649 aa)
	BcDW1_2764	Putative leucine rich repeat domain protein. (488 aa)
	BcDW1_5668	Uncharacterized protein. (655 aa)
	BcDW1_8366	Uncharacterized protein. (97 aa)
	BcDW1_8603	Putative lignostilbene dioxygenase family protein. (557 aa)
	BcDW1_8879	Putative sulfur metabolite repression control protein. (726 aa)
	BcDW1_422	Putative dna repair protein. (670 aa)
	BcDW1_7332	Putative f-box domain protein. (541 aa)
	BcDW1_9455	Uncharacterized protein. (474 aa)
	BcDW1_7970	Putative ubiquitin-conjugating enzyme protein. (231 aa)
	BcDW1_10895	Putative f-box protein pof7 protein. (517 aa)
	BcDW1_9164	Putative f-box domain protein. (452 aa)
	BcDW1_9976	Putative f-box and wd40 domain protein. (664 aa)
	BcDW1_1892	Putative cyclic nucleotide-binding domain-containing protein. (959 aa)
	BcDW1_1937	Sulfatase domain-containing protein. (605 aa)
	BcDW1_8365	Putative ubiquitin-like protein 1 protein. (77 aa)
	BcDW1_7042	Putative leucine rich repeat domain protein. (655 aa)
	BcDW1_9338	Putative cullin family protein; Belongs to the cullin family. (772 aa)
	BcDW1_8816	Putative ubiquitin-conjugating enzyme e2 protein. (681 aa)
	BcDW1_8581	Putative f-box domain protein. (598 aa)
	BcDW1_7568	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (116 aa)
	BcDW1_3930	Putative duf221 domain protein. (1917 aa)

Your Current Organism:

Botrytis cinerea BcDW1

NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BcDW1_10304	BcDW1_10895	M7U2Z4	M7TGM7	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative f-box protein pof7 protein.	0.407
BcDW1_10304	BcDW1_3158	M7U2Z4	M7U3T7	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative f-box wd-40 repeat-containing protein.	0.705
BcDW1_10304	BcDW1_7970	M7U2Z4	M7TIU3	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative ubiquitin-conjugating enzyme protein.	0.513
BcDW1_10304	BcDW1_8365	M7U2Z4	M7U8S1	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative ubiquitin-like protein 1 protein.	0.741
BcDW1_10304	BcDW1_8366	M7U2Z4	M7TPH8	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Uncharacterized protein.	0.741
BcDW1_10304	BcDW1_8879	M7U2Z4	M7TMZ1	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative sulfur metabolite repression control protein.	0.826
BcDW1_10304	BcDW1_9338	M7U2Z4	M7UEZ8	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative cullin family protein; Belongs to the cullin family.	0.970
BcDW1_10304	BcDW1_9976	M7U2Z4	M7TDE5	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	Putative f-box and wd40 domain protein.	0.705
BcDW1_10895	BcDW1_10304	M7TGM7	M7U2Z4	Putative f-box protein pof7 protein.	Putative scf e3 ubiquitin ligase complex f-box protein grra protein.	0.407
BcDW1_10895	BcDW1_1702	M7TGM7	M7URL5	Putative f-box protein pof7 protein.	Putative f-box domain-containing protein.	0.416
BcDW1_10895	BcDW1_1892	M7TGM7	M7U6W2	Putative f-box protein pof7 protein.	Putative cyclic nucleotide-binding domain-containing protein.	0.407
BcDW1_10895	BcDW1_8365	M7TGM7	M7U8S1	Putative f-box protein pof7 protein.	Putative ubiquitin-like protein 1 protein.	0.665
BcDW1_10895	BcDW1_8366	M7TGM7	M7TPH8	Putative f-box protein pof7 protein.	Uncharacterized protein.	0.665
BcDW1_10895	BcDW1_9338	M7TGM7	M7UEZ8	Putative f-box protein pof7 protein.	Putative cullin family protein; Belongs to the cullin family.	0.913
BcDW1_1560	BcDW1_9164	M7U1S9	M7TFL2	Putative bax-like protein.	Putative f-box domain protein.	0.461
BcDW1_1702	BcDW1_10895	M7URL5	M7TGM7	Putative f-box domain-containing protein.	Putative f-box protein pof7 protein.	0.416
BcDW1_1702	BcDW1_8365	M7URL5	M7U8S1	Putative f-box domain-containing protein.	Putative ubiquitin-like protein 1 protein.	0.655
BcDW1_1702	BcDW1_8366	M7URL5	M7TPH8	Putative f-box domain-containing protein.	Uncharacterized protein.	0.655
BcDW1_1702	BcDW1_9338	M7URL5	M7UEZ8	Putative f-box domain-containing protein.	Putative cullin family protein; Belongs to the cullin family.	0.763
BcDW1_1892	BcDW1_10895	M7U6W2	M7TGM7	Putative cyclic nucleotide-binding domain-containing protein.	Putative f-box protein pof7 protein.	0.407