(41 nodes) Cytosolic large ribosomal subunit network (Botrytis cinerea BcDW1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BcDW1_7887	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	BcDW1_10787	Putative 60s acidic ribosomal protein p2 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (138 aa)
	BcDW1_10710	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (287 aa)
	BcDW1_9045	Putative 60s ribosomal protein l25 protein. (154 aa)
	BcDW1_10924	Putative 60s ribosomal protein l14 protein. (145 aa)
	BcDW1_10671	Putative 60s ribosomal protein l34 protein. (114 aa)
	BcDW1_10406	Putative 60s ribosomal protein l28 protein. (150 aa)
	BcDW1_8192	Putative ser arg-related nuclear matrix protein. (942 aa)
	BcDW1_10250	Putative fungal specific transcription factor domain-containing protein. (805 aa)
	BcDW1_7775	Putative 60s ribosomal protein l10 protein. (221 aa)
	BcDW1_9771	Putative 60s ribosomal protein l21 protein. (160 aa)
	BcDW1_9979	Putative 60s ribosomal protein l12 protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	BcDW1_7420	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	BcDW1_8424	Putative 60s ribosomal protein l27a protein; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	BcDW1_7492	Putative 60s ribosomal protein l26 protein. (136 aa)
	BcDW1_7341	Putative 60s ribosomal protein l22 protein. (121 aa)
	BcDW1_7292	Putative 60s ribosomal protein l9 protein. (191 aa)
	BcDW1_6865	Putative 60s ribosomal protein l2 protein. (254 aa)
	BcDW1_4059	Putative 60s ribosomal protein l24 protein. (155 aa)
	BcDW1_3904	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	BcDW1_2112	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (217 aa)
	BcDW1_1751	Putative 60s ribosomal protein l43 protein. (92 aa)
	BcDW1_1213	Putative ribosome biogenesis gtpase protein. (662 aa)
	BcDW1_937	Putative 60s ribosomal protein l38 protein; Belongs to the eukaryotic ribosomal protein eL38 family. (83 aa)
	BcDW1_3295	Putative 60s ribosomal protein l32 protein. (131 aa)
	BcDW1_2928	Putative 60s ribosomal protein l13 protein. (215 aa)
	BcDW1_1902	Putative 60s ribosomal protein l23 protein; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	BcDW1_8511	Putative microtubule associated protein. (233 aa)
	BcDW1_1145	Putative complex i intermediate-associated protein. (802 aa)
	BcDW1_931	Putative 60s ribosomal protein l31 protein. (125 aa)
	BcDW1_7329	Putative 60s ribosomal protein l5 protein. (292 aa)
	BcDW1_7290	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
	BcDW1_10308	Putative 60s ribosomal protein l16 protein; Belongs to the universal ribosomal protein uL13 family. (184 aa)
	BcDW1_10242	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	BcDW1_9661	Putative 60s ribosomal protein l35 protein. (138 aa)
	BcDW1_8965	Putative 60s ribosomal protein l18 protein. (205 aa)
	BcDW1_5122	Putative 60s ribosomal protein l20 protein. (237 aa)
	BcDW1_7776	Putative 60s ribosomal protein l30 protein. (111 aa)
	BcDW1_1440	Putative ribosomal protein l37e protein. (461 aa)
	BcDW1_4079	Putative 60s ribosomal protein l4 protein. (373 aa)
	BcDW1_3875	Putative 60s ribosomal protein l33 protein. (109 aa)

Your Current Organism:

Botrytis cinerea BcDW1

NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BcDW1_10242	BcDW1_10250	M7UCK7	M7TID1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative fungal specific transcription factor domain-containing protein.	0.984
BcDW1_10242	BcDW1_10308	M7UCK7	M7UC69	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l16 protein; Belongs to the universal ribosomal protein uL13 family.	0.999
BcDW1_10242	BcDW1_10406	M7UCK7	M7THW4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l28 protein.	0.999
BcDW1_10242	BcDW1_10671	M7UCK7	M7THV0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l34 protein.	0.999
BcDW1_10242	BcDW1_10710	M7UCK7	M7TBA2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
BcDW1_10242	BcDW1_10787	M7UCK7	M7TB45	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s acidic ribosomal protein p2 protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
BcDW1_10242	BcDW1_10924	M7UCK7	M7TGE0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l14 protein.	0.999
BcDW1_10242	BcDW1_1145	M7UCK7	M7U9K2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative complex i intermediate-associated protein.	0.992
BcDW1_10242	BcDW1_1213	M7UCK7	M7U2G7	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative ribosome biogenesis gtpase protein.	0.860
BcDW1_10242	BcDW1_1440	M7UCK7	M7USH4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative ribosomal protein l37e protein.	0.998
BcDW1_10242	BcDW1_1751	M7UCK7	M7U0Z5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l43 protein.	0.998
BcDW1_10242	BcDW1_1902	M7UCK7	M7U6X2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l23 protein; Belongs to the universal ribosomal protein uL14 family.	0.999
BcDW1_10242	BcDW1_2112	M7UCK7	M7U039	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
BcDW1_10242	BcDW1_2928	M7UCK7	M7U4M8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l13 protein.	0.999
BcDW1_10242	BcDW1_3295	M7UCK7	M7U3F8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l32 protein.	0.999
BcDW1_10242	BcDW1_3875	M7UCK7	M7UUD2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l33 protein.	0.999
BcDW1_10242	BcDW1_3904	M7UCK7	M7TV04	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
BcDW1_10242	BcDW1_4059	M7UCK7	M7TUP8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l24 protein.	0.999
BcDW1_10242	BcDW1_4079	M7UCK7	M7UTZ9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l4 protein.	0.993
BcDW1_10242	BcDW1_5122	M7UCK7	M7UHH7	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Putative 60s ribosomal protein l20 protein.	0.999