STRINGSTRING
BcDW1_10335 BcDW1_10335 BcDW1_7767 BcDW1_7767 BcDW1_6400 BcDW1_6400 BcDW1_8287 BcDW1_8287 BcDW1_6859 BcDW1_6859 BcDW1_6620 BcDW1_6620 BcDW1_5426 BcDW1_5426 BcDW1_2523 BcDW1_2523 BcDW1_4 BcDW1_4 BcDW1_1755 BcDW1_1755 BcDW1_1472 BcDW1_1472 BcDW1_1322 BcDW1_1322 BcDW1_513 BcDW1_513 BcDW1_10502 BcDW1_10502 BcDW1_4348 BcDW1_4348
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BcDW1_10335Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
BcDW1_7767Putative vesicle-associated membrane protein 7 protein; Belongs to the synaptobrevin family. (245 aa)
BcDW1_6400Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (492 aa)
BcDW1_8287Putative signal sequence receptor alpha subunit protein. (660 aa)
BcDW1_6859Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (177 aa)
BcDW1_6620Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
BcDW1_5426Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (200 aa)
BcDW1_2523AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)
BcDW1_4Putative adaptor complexes medium subunit family protein; Belongs to the adaptor complexes medium subunit family. (557 aa)
BcDW1_1755Putative trafficking protein particle complex subunit 2 protein. (163 aa)
BcDW1_1472Putative snare ykt6 protein; Belongs to the synaptobrevin family. (197 aa)
BcDW1_1322Putative ap-1 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family. (446 aa)
BcDW1_513Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (194 aa)
BcDW1_10502AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (144 aa)
BcDW1_4348AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (187 aa)
Your Current Organism:
Botrytis cinerea BcDW1
NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1
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