25 items (Botrytis cinerea BcDW1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BcDW1_5763	Putative esterase lipase thioesterase protein. (515 aa)
	BcDW1_5054	Putative serine protease protein; Belongs to the peptidase S8 family. (521 aa)
	BcDW1_7160	Putative peptidase s8 subtilisin kexin sedolisin protein. (868 aa)
	BcDW1_3553	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (699 aa)
	BcDW1_5951	Ubiquitin-like domain-containing protein. (324 aa)
	BcDW1_5913	Uncharacterized protein. (370 aa)
	BcDW1_10792	Putative alpha beta hydrolase fold protein. (322 aa)
	BcDW1_10335	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
	BcDW1_10015	Putative alpha beta-hydrolase protein. (332 aa)
	BcDW1_6820	Putative alpha beta hydrolase fold-3 domain-containing protein. (343 aa)
	BcDW1_8685	Putative subtilisin-like protease pr1a protein; Belongs to the peptidase S8 family. (402 aa)
	BcDW1_8641	Putative esterase protein. (305 aa)
	BcDW1_6995	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (742 aa)
	BcDW1_4222	Putative lipase esterase protein. (514 aa)
	BcDW1_6266	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (234 aa)
	BcDW1_5234	Putative lipase 2 protein. (315 aa)
	BcDW1_10927	Putative lipase esterase protein. (387 aa)
	BcDW1_10177	Putative patched sphingolipid transporter protein. (1278 aa)
	BcDW1_9928	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1681 aa)
	BcDW1_269	Putative hydantoin racemase protein. (270 aa)
	BcDW1_98	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (959 aa)
	BcDW1_5078	Putative lipase esterase protein. (458 aa)
	BcDW1_8015	Putative lipase 2 protein. (337 aa)
	BcDW1_10502	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (144 aa)
	BcDW1_5883	Putative lipase esterase protein. (337 aa)

Your Current Organism:

Botrytis cinerea BcDW1

NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BcDW1_10335	BcDW1_10502	M7TIQ0	M7UBX8	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
BcDW1_10335	BcDW1_3553	M7TIQ0	M7ULQ2	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.976
BcDW1_10335	BcDW1_5054	M7TIQ0	M7UHU3	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Putative serine protease protein; Belongs to the peptidase S8 family.	0.492
BcDW1_10335	BcDW1_5913	M7TIQ0	M7UP07	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.422
BcDW1_10335	BcDW1_5951	M7TIQ0	M7UNW2	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Ubiquitin-like domain-containing protein.	0.954
BcDW1_10335	BcDW1_6266	M7TIQ0	M7TV01	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.932
BcDW1_10335	BcDW1_6995	M7TIQ0	M7TSU8	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.954
BcDW1_10335	BcDW1_7160	M7TIQ0	M7UKL0	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Putative peptidase s8 subtilisin kexin sedolisin protein.	0.402
BcDW1_10335	BcDW1_8685	M7TIQ0	M7TMP3	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Putative subtilisin-like protease pr1a protein; Belongs to the peptidase S8 family.	0.492
BcDW1_10335	BcDW1_98	M7TIQ0	M7U624	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.993
BcDW1_10335	BcDW1_9928	M7TIQ0	M7U469	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.940
BcDW1_10502	BcDW1_10335	M7UBX8	M7TIQ0	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Putative ap-2 complex subunit mu-1 protein; Belongs to the adaptor complexes medium subunit family.	0.999
BcDW1_10502	BcDW1_3553	M7UBX8	M7ULQ2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.962
BcDW1_10502	BcDW1_5951	M7UBX8	M7UNW2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Ubiquitin-like domain-containing protein.	0.943
BcDW1_10502	BcDW1_6266	M7UBX8	M7TV01	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.912
BcDW1_10502	BcDW1_6995	M7UBX8	M7TSU8	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.943
BcDW1_10502	BcDW1_98	M7UBX8	M7U624	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.993
BcDW1_10502	BcDW1_9928	M7UBX8	M7U469	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.926
BcDW1_10927	BcDW1_4222	M7U1B9	M7TU33	Putative lipase esterase protein.	Putative lipase esterase protein.	0.439
BcDW1_10927	BcDW1_6820	M7U1B9	M7TM46	Putative lipase esterase protein.	Putative alpha beta hydrolase fold-3 domain-containing protein.	0.434