STRINGSTRING
TPE_0183 TPE_0183 TPE_0186 TPE_0186 TPE_0188 TPE_0188 TPE_0189 TPE_0189 TPE_0190 TPE_0190 TPE_0191 TPE_0191 TPE_0194 TPE_0194 TPE_0195 TPE_0195 ptmE ptmE TPE_0198 TPE_0198 TPE_0199 TPE_0199 TPE_0200 TPE_0200 TPE_0201 TPE_0201 TPE_0202 TPE_0202 TPE_0203 TPE_0203 TPE_0205 TPE_0205 TPE_0206 TPE_0206 TPE_0207 TPE_0207 TPE_0208 TPE_0208 TPE_0209 TPE_0209 TPE_0210 TPE_0210 TPE_0211 TPE_0211 TPE_0212 TPE_0212 TPE_0213 TPE_0213 TPE_0214 TPE_0214 rfbA rfbA rfbC rfbC rfbD rfbD rfbB rfbB TPE_0728 TPE_0728 TPE_1113 TPE_1113 TPE_2048 TPE_2048 TPE_2273 TPE_2273 TPE_2560 TPE_2560 TPE_2683 TPE_2683 TPE_2684 TPE_2684
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TPE_0183Lipopolysaccharide biosynthesis protein. (365 aa)
TPE_0186DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (350 aa)
TPE_0188Transferase hexapeptide repeat containingprotein. (163 aa)
TPE_0189Polysaccharide biosynthesis protein. (461 aa)
TPE_0190Polysaccharide biosynthesis protein. (398 aa)
TPE_0191Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (310 aa)
TPE_0194Hypothetical protein. (71 aa)
TPE_0195UDP-N-acetylglucosamine 2-epimerase. (387 aa)
ptmELmbE-like protein. (223 aa)
TPE_0198Hypothetical protein. (41 aa)
TPE_0199Hypothetical protein. (369 aa)
TPE_0200Transferase hexapeptide repeat containingprotein. (207 aa)
TPE_0201Sialic acid synthase. (321 aa)
TPE_0202Putative N-acylneuraminate cytidylyltransferase. (235 aa)
TPE_0203Nucleotidyltransferase. (292 aa)
TPE_0205Hypothetical protein. (463 aa)
TPE_0206N-acetyl sugar amidotransferase. (372 aa)
TPE_0207UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (357 aa)
TPE_0208Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (440 aa)
TPE_0209Glycosyltransferase. (370 aa)
TPE_0210Capsule biosynthesis protein. (331 aa)
TPE_0211Lipopolysaccharide biosynthesis protein LicD. (275 aa)
TPE_0212Capsular polysaccharide synthesis protein. (322 aa)
TPE_0213Acyltransferase 3. (334 aa)
TPE_0214Family 2 glycosyl transferase. (274 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (291 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (180 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (290 aa)
rfbBdTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (366 aa)
TPE_0728Hypothetical protein. (305 aa)
TPE_1113Exopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (391 aa)
TPE_2048Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (347 aa)
TPE_2273Mannosyltransferase. (373 aa)
TPE_2560Capsular polysaccharide biosynthesis protein. (493 aa)
TPE_2683Glycosyl transferase. (199 aa)
TPE_2684Hypothetical protein. (793 aa)
Your Current Organism:
Treponema pedis
NCBI taxonomy Id: 1291379
Other names: T. pedis str. T A4, Treponema pedis str. T A4
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