STRINGSTRING
TPE_0061 TPE_0061 TPE_0062 TPE_0062 TPE_0063 TPE_0063 opuD1 opuD1 TPE_0159 TPE_0159 TPE_0160 TPE_0160 TPE_0161 TPE_0161 grdC grdC grdD grdD grdA grdA TPE_1230 TPE_1230 TPE_1875 TPE_1875 grdB-2 grdB-2 TPE_2133 TPE_2133 grdE-2 grdE-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TPE_0061Betaine reductase complex component B subunitgamma. (65 aa)
TPE_0062Betaine reductase complex component B subunitgamma. (347 aa)
TPE_0063Glycine reductase complex proprotein. (441 aa)
opuD1Choline/carnitine/betaine transporter OpuD1; Belongs to the BCCT transporter (TC 2.A.15) family. (495 aa)
TPE_0159Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase. (77 aa)
TPE_0160Sarcosine reductase complex component B subunitalpha. (349 aa)
TPE_0161Sarcosine reductase complex component B subunitalpha. (428 aa)
grdCGlycine reductase complex protein GrdC. (512 aa)
grdDGlycine reductase complex protein GrdD. (384 aa)
grdAGlycine/sarcosine/betaine reductase complex protein A. (42 aa)
TPE_1230Glycine/sarcosine/betaine reductase complex protein A. (108 aa)
TPE_1875grdX protein. (127 aa)
grdB-2Glycine reductase complex selenoprotein GrdB2. (74 aa)
TPE_2133Glycine reductase complex selenoprotein GrdB2. (347 aa)
grdE-2Glycine reductase complex proprotein GrdE2. (417 aa)
Your Current Organism:
Treponema pedis
NCBI taxonomy Id: 1291379
Other names: T. pedis str. T A4, Treponema pedis str. T A4
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