Your Input: | |
| | TPE_1900 | TPR protein. (398 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (561 aa) |
| | TPE_1947 | ATPase AAA. (538 aa) |
| | TPE_1966 | ATP:guanido phosphotransferase. (353 aa) |
| | TPE_1978 | Ribosomal subunit interface protein. (109 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (483 aa) |
| | purM | Phosphoribosylaminoimidazole synthetase. (350 aa) |
| | TPE_2030 | 3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa) |
| | TPE_2099 | Deoxycytidylate deaminase. (168 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (726 aa) |
| | TPE_2116 | TPR protein. (242 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (291 aa) |
| | TPE_2193 | C4 zinc finger. (119 aa) |
| | TPE_2237 | Flavocytochrome c. (580 aa) |
| | TPE_2286 | ATPase AAA. (547 aa) |
| | TPE_2307 | Transcriptional regulator. (361 aa) |
| | TPE_2315 | DHH super, subfamily 1. (335 aa) |
| | TPE_2319 | Patatin. (303 aa) |
| | TPE_2328 | ATPase AAA. (533 aa) |
| | TPE_2340 | Phosphoribulokinase/uridine kinase. (550 aa) |
| | rpmF | 50S ribosomal protein L32. (42 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (657 aa) |
| | TPE_2353 | Hypothetical protein. (295 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (209 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA. (67 aa) |
| | TPE_2371 | ATPase AAA. (542 aa) |
| | TPE_2380 | TPR protein. (383 aa) |
| | radC | DNA repair protein RadC; Belongs to the UPF0758 family. (242 aa) |
| | TPE_2396 | TPR domain-containing protein. (745 aa) |
| | TPE_2410 | Acetyltransferase. (161 aa) |
| | TPE_2414 | TfoX. (48 aa) |
| | TPE_2434 | Hypothetical protein. (286 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | TPE_2471 | long-chain-fatty-acid--CoA ligase. (575 aa) |
| | TPE_2492 | Hypothetical protein. (204 aa) |
| | TPE_2528 | Metal dependent phosphohydrolase. (416 aa) |
| | rpmI | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (66 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (100 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (114 aa) |
| | rpsP | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (81 aa) |
| | rpmB | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (63 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (126 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (155 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (150 aa) |
| | rpmD | 50S ribosomal protein L30. (61 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (173 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (123 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (189 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (106 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (90 aa) |
| | rpmC | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (69 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (239 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (94 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (190 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (208 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | TPE_2647 | ATPase. (331 aa) |
| | TPE_2681 | Hypothetical protein. (398 aa) |
| | TPE_2685 | ATPase AAA. (531 aa) |
| | TPE_2689 | FR47-like protein. (49 aa) |
| | TPE_2691 | Hypothetical protein. (152 aa) |
| | TPE_2699 | Fumarate reductase/succinate dehydrogenaseflavoprotein domain-containing protein. (118 aa) |
| | draG | ADP-ribosylglycohydrolase. (267 aa) |
| | TPE_2713 | Hypothetical protein. (530 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (209 aa) |
| | TPE_2722 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (98 aa) |
| | TPE_2730 | ATPase AAA. (540 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (452 aa) |
| | TPE_2741 | TPR protein. (225 aa) |
| | TPE_2744 | Lipoprotein. (203 aa) |
| | TPE_2765 | Sir2 family transcriptional regulator. (252 aa) |
| | rpmH | 50S ribosomal protein L34. (42 aa) |
| | TPE_2785 | TPR protein. (446 aa) |
| | TPE_2786 | Diguanylate cyclase. (1767 aa) |
| | TPE_2787 | Diguanylate cyclase. (1775 aa) |
| | rnz | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (308 aa) |
| | recQ | ATP-dependent DNA helicase RecQ. (625 aa) |
| | TPE_0011 | Hypothetical protein. (257 aa) |
| | TPE_0013 | Hypothetical protein. (398 aa) |
| | TPE_0014 | Cation efflux; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (304 aa) |
| | TPE_0029 | ATPase AAA. (537 aa) |
| | TPE_0051 | Hypothetical protein. (322 aa) |
| | TPE_0072 | Hexokinase. (436 aa) |
| | TPE_0143 | Ribosomal small subunit Rsm22. (468 aa) |
| | TPE_0165 | DHH super. (407 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | TPE_0201 | Sialic acid synthase. (321 aa) |
| | aroH | Chorismate mutase. (116 aa) |
| | TPE_0269 | L-fuculose phosphate aldolase. (366 aa) |
| | rpsI | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (129 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | guaB | Inosine 5-monophosphate dehydrogenase. (504 aa) |
| | TPE_0358 | HAMP domain-containing protein. (1544 aa) |
| | TPE_0387 | ATP-dependent DNA helicase RecQ. (563 aa) |
| | recO | Recombination protein O. (264 aa) |
| | TPE_0399 | Formiminotransferase-cyclodeaminase. (213 aa) |
| | TPE_0403 | M16 family peptidase. (1003 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | nadD | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (208 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (226 aa) |
| | fhs | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (515 aa) |
| | TPE_0470 | AMP-binding protein. (641 aa) |
| | atpB-2 | V-type ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (493 aa) |
| | TPE_0490 | class-V aminotransferase. (392 aa) |
| | rnhA | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (150 aa) |
| | TPE_0560 | ATPase AAA. (531 aa) |
| | TPE_0576 | Hypothetical protein. (254 aa) |
| | TPE_0585 | ATPase AAA. (534 aa) |
| | TPE_0589 | Methanol dehydrogenase regulatory protein MoxR. (332 aa) |
| | TPE_0644 | DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family. (377 aa) |
| | TPE_0666 | AMP-binding protein. (577 aa) |
| | TPE_0667 | ParB-like nuclease. (130 aa) |
| | TPE_0671 | Hypothetical protein. (81 aa) |
| | TPE_0674 | M20/M25/M40 family peptidase. (390 aa) |
| | TPE_0704 | Hypothetical protein. (59 aa) |
| | mgtE | Magnesium transporter; Acts as a magnesium transporter. (452 aa) |
| | TPE_0717 | Phosphatidate cytidylyltransferase. (207 aa) |
| | TPE_0741 | Sigma factor regulatory protein. (708 aa) |
| | TPE_0743 | methylated-DNA--protein- cysteinemethyltransferase 1; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (177 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (359 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (214 aa) |
| | TPE_0827 | Formiminotransferase. (298 aa) |
| | TPE_0860 | protein-S-isoprenylcysteinemethyltransferase- like protein. (168 aa) |
| | TPE_0872 | Hypothetical protein. (148 aa) |
| | TPE_0886 | Hypothetical protein. (230 aa) |
| | fabG | 3-oxoacyl-[acyl-carrier protein] reductase. (265 aa) |
| | TPE_0907 | neuB. (385 aa) |
| | TPE_0945 | ATPase AAA. (534 aa) |
| | TPE_0958 | ATPase AAA. (547 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | TPE_0962 | Riboflavin biosynthesis protein. (280 aa) |
| | TPE_0965 | 3-oxo-5-alpha-steroid 4-dehydrogenase. (257 aa) |
| | TPE_0966 | TPR protein. (1018 aa) |
| | TPE_0985 | AMP-binding protein. (549 aa) |
| | TPE_0987 | Hypothetical protein. (288 aa) |
| | TPE_1008 | Acetamidase/formamidase. (297 aa) |
| | TPE_1029 | TraB. (396 aa) |
| | TPE_1030 | DHH super, subfamily 1. (333 aa) |
| | TPE_1032 | ParB family partitioning protein; Belongs to the ParB family. (298 aa) |
| | ychF | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (368 aa) |
| | TPE_1071 | TPR protein. (616 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (270 aa) |
| | pdxS | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (282 aa) |
| | TPE_1129 | Hypothetical protein. (366 aa) |
| | sbcD | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (395 aa) |
| | TPE_1207 | Putative FMN-dependent family dehydrogenase. (308 aa) |
| | TPE_1240 | Ferredoxin like protein. (94 aa) |
| | TPE_1241 | Electron transfer flavoprotein-quinoneoxidoreductase ydiS. (431 aa) |
| | TPE_1249 | Arsenical pump-driving ATPase. (399 aa) |
| | TPE_1250 | Arsenical pump-driving ATPase. (387 aa) |
| | TPE_1253 | Electron transfer flavoprotein subunit alpha. (336 aa) |
| | TPE_1255 | ATPase AAA. (534 aa) |
| | TPE_1324 | TfoX. (57 aa) |
| | TPE_1335 | Hypothetical protein. (139 aa) |
| | TPE_1337 | Hypothetical protein. (88 aa) |
| | TPE_1389 | ATPase AAA. (531 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (89 aa) |
| | TPE_1424 | HU family DNA-binding protein; Belongs to the bacterial histone-like protein family. (124 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (94 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (87 aa) |
| | TPE_1478 | FMN-binding protein. (112 aa) |
| | TPE_1490 | TPR protein. (716 aa) |
| | TPE_1492 | TPR protein. (456 aa) |
| | TPE_1494 | Sigma factor regulatory protein. (555 aa) |
| | TPE_1508 | Pyridoxal-dependent family decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (389 aa) |
| | TPE_1524 | Hypothetical protein. (337 aa) |
| | ispE | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (283 aa) |
| | rplY | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (198 aa) |
| | TPE_1537 | Hypothetical protein. (227 aa) |
| | TPE_1547 | Metallo-beta-lactamase. (324 aa) |
| | TPE_1552 | Recombination factor protein RarA. (444 aa) |
| | sufB | FeS assembly protein SufB. (494 aa) |
| | sufD | FeS assembly protein SufD. (370 aa) |
| | TPE_1563 | TPR protein. (658 aa) |
| | TPE_1569 | Hypothetical protein. (496 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (436 aa) |
| | TPE_1690 | ATP-dependent helicase DinG. (713 aa) |
| | TPE_1767 | Transcriptional regulator. (361 aa) |
| | TPE_1775 | Hypothetical protein. (547 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (599 aa) |
| | TPE_1791 | Vacuolar H+transporting two-sector ATPase Fsubunit. (102 aa) |
| | atpB | V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (431 aa) |
| | TPE_1814 | ATPase AAA. (535 aa) |
| | ybeY | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (156 aa) |
| | rpsU | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (73 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa) |
| | cmk-2 | Cytidylate kinase. (799 aa) |
