STRINGSTRING
AAES_05271 AAES_05271 AAES_69774 AAES_69774 AAES_50834 AAES_50834 AAES_166335 AAES_166335 AAES_162978 AAES_162978 AAES_00086 AAES_00086 AAES_166339 AAES_166339 AAES_113113 AAES_113113 AAES_104777 AAES_104777 AAES_68403 AAES_68403 AAES_118184 AAES_118184 AAES_113123 AAES_113123 LSM5 LSM5 AAES_69749 AAES_69749 AAES_35878 AAES_35878 AAES_188532 AAES_188532 AAES_48960 AAES_48960 AAES_165759 AAES_165759 AAES_142027 AAES_142027 AAES_84863 AAES_84863 AAES_43326 AAES_43326 AAES_117445 AAES_117445 AAES_108041 AAES_108041 AAES_74747 AAES_74747 AAES_20162 AAES_20162 AAES_17031 AAES_17031 AAES_21544 AAES_21544 AAES_15955 AAES_15955 AAES_163190 AAES_163190 AAES_154952 AAES_154952 AAES_79459 AAES_79459 AAES_66273 AAES_66273 AAES_31873 AAES_31873 LSM8 LSM8 AAES_172926 AAES_172926 LSM5-2 LSM5-2 AAES_160532 AAES_160532 AAES_142021 AAES_142021 AAES_111750 AAES_111750 AAES_106663 AAES_106663 AAES_111685 AAES_111685 AAES_84824 AAES_84824 AAES_74764 AAES_74764 AAES_70138 AAES_70138
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AAES_05271Pre-mRNA-splicing factor 38B. (547 aa)
AAES_69774Splicing factor 3B subunit 1-like protein. (91 aa)
AAES_50834Splicing factor 3B subunit 3. (1217 aa)
AAES_166335Splicing factor 3A subunit 1-like protein. (93 aa)
AAES_162978Microfibrillar-associated protein 1. (384 aa)
AAES_00086Splicing factor 3B subunit 6. (125 aa)
AAES_166339Splicing factor 3A subunit 1. (546 aa)
AAES_113113WW domain-binding protein 4. (328 aa)
AAES_104777U2 small nuclear ribonucleoprotein A. (255 aa)
AAES_68403Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
AAES_118184Splicing factor 3A subunit 2. (315 aa)
AAES_113123WW domain-binding protein 4-like protein. (97 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
AAES_69749Splicing factor 3B subunit 1. (1238 aa)
AAES_35878Pre-mRNA-processing factor 6. (977 aa)
AAES_188532Small nuclear ribonucleoprotein-associated protein N. (181 aa)
AAES_48960Uncharacterized protein. (71 aa)
AAES_165759RING-type domain-containing protein. (143 aa)
AAES_142027Peptidyl-prolyl cis-trans isomerase CWC27 like protein. (379 aa)
AAES_84863Prpf8 protein. (184 aa)
AAES_43326Pre-mRNA-splicing factor 38A. (312 aa)
AAES_117445U6 snRNA-associated Sm-like protein LSm6. (80 aa)
AAES_108041Zinc finger, matrin type 2. (196 aa)
AAES_74747Uncharacterized protein. (700 aa)
AAES_20162Uncharacterized protein. (790 aa)
AAES_17031Small nuclear ribonucleoprotein Sm D3. (126 aa)
AAES_21544Pre-mRNA-splicing factor CWC22. (908 aa)
AAES_15955Smad nuclear-interacting protein 1. (419 aa)
AAES_163190U5 small nuclear ribonucleoprotein component. (799 aa)
AAES_154952Uncharacterized protein. (353 aa)
AAES_79459Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
AAES_66273U6 snRNA-associated Sm-like protein LSm7. (103 aa)
AAES_31873Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
AAES_172926Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (95 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
AAES_160532U4/U6 small nuclear ribonucleoprotein Prp4. (485 aa)
AAES_142021Peptidyl-prolyl cis-trans isomerase CWC27 like protein. (160 aa)
AAES_111750Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (146 aa)
AAES_106663WD40 repeat-containing protein SMU1. (513 aa)
AAES_111685PHD finger-like domain-containing protein 5A-like protein. (110 aa)
AAES_84824Pre-mRNA-processing-splicing factor 8 isoform X3. (2097 aa)
AAES_74764U5 small nuclear ribonucleoprotein 200 kDa helicase. (1038 aa)
AAES_70138U6 snRNA-associated Sm-like protein LSm4. (95 aa)
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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