STRINGSTRING
AAES_165531 AAES_165531 AAES_154792 AAES_154792 AAES_148577 AAES_148577 AAES_132852 AAES_132852 AAES_134334 AAES_134334 AAES_133175 AAES_133175 AAES_126476 AAES_126476 AAES_111898 AAES_111898 AAES_108380 AAES_108380 AAES_101865 AAES_101865 AAES_99629 AAES_99629 AAES_96247 AAES_96247 AAES_91053 AAES_91053 AAES_75323 AAES_75323 AAES_73510 AAES_73510 AAES_47615 AAES_47615 AAES_202922 AAES_202922 AAES_51132 AAES_51132 AAES_193392 AAES_193392 AAES_41524 AAES_41524 AAES_41422 AAES_41422 AAES_43204 AAES_43204 AAES_162583 AAES_162583 AAES_155457 AAES_155457 AAES_146067 AAES_146067 AAES_33462 AAES_33462 AAES_159180 AAES_159180 AAES_106700 AAES_106700 AAES_154782 AAES_154782 AAES_103408 AAES_103408 AAES_146822 AAES_146822 AAES_99158 AAES_99158 AAES_255367 AAES_255367 AAES_92406 AAES_92406 AAES_217603 AAES_217603 AAES_63257 AAES_63257 AAES_63261 AAES_63261 AAES_188532 AAES_188532 AAES_40351 AAES_40351 AAES_246276 AAES_246276 AAES_131850 AAES_131850 AAES_131727 AAES_131727 AAES_110864 AAES_110864 AAES_62086 AAES_62086 AAES_163309 AAES_163309 AAES_141889 AAES_141889 AAES_136057 AAES_136057 AAES_92201 AAES_92201 AAES_26222 AAES_26222 AAES_25758 AAES_25758 AAES_24646 AAES_24646 AAES_47158 AAES_47158 AAES_47226 AAES_47226 AAES_17031 AAES_17031 AAES_58556 AAES_58556 AAES_147969 AAES_147969 AAES_244731 AAES_244731 AAES_43902 AAES_43902 AAES_39296 AAES_39296 AAES_33338 AAES_33338 AAES_26545 AAES_26545 AAES_31873 AAES_31873 AAES_23858 AAES_23858 AAES_06828 AAES_06828 AAES_15876 AAES_15876 AAES_02303 AAES_02303 AAES_13034 AAES_13034
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AAES_165531Cleavage and polyadenylation specificity factor subunit 7-like protein. (133 aa)
AAES_154792Histone RNA hairpin-binding protein. (118 aa)
AAES_148577Serine/arginine-rich splicing factor 3. (164 aa)
AAES_132852THO complex subunit 2. (1486 aa)
AAES_134334Pre-mRNA cleavage complex 2 protein Pcf11. (2143 aa)
AAES_133175Cleavage and polyadenylation specificity factor subunit 6 isoform X2. (554 aa)
AAES_126476WD repeat-containing protein 25. (509 aa)
AAES_111898Polymerase delta-interacting protein 3. (713 aa)
AAES_108380Pre-mRNA-splicing factor SLU7 isoform X1. (614 aa)
AAES_101865UAP56-interacting factor. (307 aa)
AAES_99629Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1140 aa)
AAES_96247Serine/arginine-rich splicing factor 2. (221 aa)
AAES_91053Eukaryotic initiation factor 4A-III-like protein; Belongs to the DEAD box helicase family. (433 aa)
AAES_75323C3H1-type domain-containing protein. (1521 aa)
AAES_73510THO complex subunit 1. (541 aa)
AAES_47615RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (108 aa)
AAES_202922Pre-mRNA 3'-end-processing factor FIP1. (549 aa)
AAES_51132Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
AAES_193392Polyribonucleotide 5'-hydroxyl-kinase Clp1-like isoform X1. (361 aa)
AAES_41524Serine/arginine-rich splicing factor 5-like protein. (184 aa)
AAES_41422Serine/arginine-rich splicing factor 5 isoform X6. (185 aa)
AAES_43204Uncharacterized protein. (424 aa)
AAES_162583Uncharacterized protein. (294 aa)
AAES_155457WH2 domain-containing protein. (1066 aa)
AAES_146067Serine/arginine repetitive matrix protein 1. (1028 aa)
AAES_33462Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (157 aa)
AAES_159180Uncharacterized protein. (257 aa)
AAES_106700Nuclear cap-binding protein subunit 1. (604 aa)
AAES_154782Histone RNA hairpin-binding protein. (360 aa)
AAES_103408Splicing factor U2AF 35 kDa subunit. (235 aa)
AAES_146822Ankyrin repeat domain-containing protein 9-like protein. (296 aa)
AAES_99158Embryonic polyadenylate-binding protein 2. (277 aa)
AAES_255367Tumor protein p63-regulated protein 1-like protein. (188 aa)
AAES_92406Cleavage stimulation factor subunit 3. (718 aa)
AAES_217603Uncharacterized protein. (240 aa)
AAES_63257CPSF73-100_C domain-containing protein. (78 aa)
AAES_63261Cleavage and polyadenylation specificity factor subunit 3. (612 aa)
AAES_188532Small nuclear ribonucleoprotein-associated protein N. (181 aa)
AAES_40351Cleavage and polyadenylation specificity factor subunit 2. (709 aa)
AAES_246276Uncharacterized protein. (1240 aa)
AAES_131850Serine/arginine-rich splicing factor 1. (244 aa)
AAES_131727Zinc finger protein 318. (2161 aa)
AAES_110864Serine/arginine-rich splicing factor 6. (341 aa)
AAES_62086Serine/arginine-rich splicing factor 11. (458 aa)
AAES_163309Uncharacterized protein. (91 aa)
AAES_141889Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (583 aa)
AAES_136057RNA-binding protein with serine-rich domain 1. (288 aa)
AAES_92201Pre-mRNA 3' end processing protein WDR33 isoform X3. (1247 aa)
AAES_26222Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (182 aa)
AAES_25758Pre-mRNA 3'-end-processing factor FIP1-like protein. (560 aa)
AAES_24646Cleavage stimulation factor subunit 2 isoform X2. (434 aa)
AAES_47158THO complex subunit 3. (323 aa)
AAES_47226LSM11, U7 small nuclear RNA associated. (351 aa)
AAES_17031Small nuclear ribonucleoprotein Sm D3. (126 aa)
AAES_58556Cleavage stimulation factor subunit 1 isoform X1. (488 aa)
AAES_147969Regulator of nonsense transcripts 3A. (501 aa)
AAES_244731THO complex subunit 5. (787 aa)
AAES_43902Uncharacterized protein. (68 aa)
AAES_39296Pre-mRNA-processing factor 17. (580 aa)
AAES_33338Uncharacterized protein. (247 aa)
AAES_26545THO complex subunit 7. (204 aa)
AAES_31873Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
AAES_23858Regulator of nonsense transcripts 3B. (316 aa)
AAES_06828Chromatin target of PRMT1 protein isoform X1. (248 aa)
AAES_15876U7 snRNA-associated Sm-like protein LSm10. (123 aa)
AAES_02303C3H1-type domain-containing protein. (84 aa)
AAES_13034Cleavage and polyadenylation specificity factor subunit 4 isoform X3. (243 aa)
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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