STRINGSTRING
uppS uppS IC006_1913 IC006_1913 IC006_1979 IC006_1979 GCA_001316085_00010 GCA_001316085_00010 fni fni IC006_1981 IC006_1981 GCA_001316085_02208 GCA_001316085_02208 IC006_0217 IC006_0217 IC006_1052 IC006_1052 IC006_1051 IC006_1051 IC006_1049 IC006_1049 GCA_001316085_02450 GCA_001316085_02450 IC006_1994 IC006_1994 GCA_001316085_03103 GCA_001316085_03103 GCA_001316085_03104 GCA_001316085_03104 GCA_001316085_00673 GCA_001316085_00673 IC006_2737 IC006_2737 GCA_001316085_00681 GCA_001316085_00681 IC006_2758 IC006_2758 IC006_2771 IC006_2771 IC006_0146 IC006_0146 IC006_1105 IC006_1105 GCA_001316085_01061 GCA_001316085_01061 GCA_001316085_01062 GCA_001316085_01062 IC006_1116 IC006_1116 carS carS IC006_1281 IC006_1281 IC006_1304 IC006_1304 IC006_1306 IC006_1306 IC006_1364 IC006_1364 IC006_1372 IC006_1372 IC006_2555 IC006_2555 IC006_2556 IC006_2556 IC006_2596 IC006_2596 GCA_001316085_01493 GCA_001316085_01493 IC006_2600 IC006_2600 GCA_001316085_01523 GCA_001316085_01523 IC006_2625 IC006_2625 IC006_0872 IC006_0872 IC006_2264 IC006_2264 IC006_2263 IC006_2263 IC006_2247 IC006_2247 IC006_2732 IC006_2732 IC006_2729 IC006_2729 GCA_001316085_00668 GCA_001316085_00668 IC006_2719 IC006_2719 GCA_001316085_00656 GCA_001316085_00656 mvk mvk IC006_1566 IC006_1566 egsA egsA IC006_1789 IC006_1789 IC006_1798 IC006_1798
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uppSUnannotated protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (261 aa)
IC006_1913Unannotated protein. (377 aa)
IC006_1979Unannotated protein. (133 aa)
GCA_001316085_00010Unannotated protein. (100 aa)
fniUnannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (373 aa)
IC006_1981Unannotated protein; Belongs to the FPP/GGPP synthase family. (331 aa)
GCA_001316085_02208Unannotated protein. (148 aa)
IC006_0217Unannotated protein. (167 aa)
IC006_1052Unannotated protein; Belongs to the thiolase-like superfamily. UPF0219 family. (353 aa)
IC006_1051Unannotated protein. (337 aa)
IC006_1049Unannotated protein; Belongs to the HMG-CoA reductase family. (305 aa)
GCA_001316085_02450Unannotated protein. (113 aa)
IC006_1994Unannotated protein. (85 aa)
GCA_001316085_03103Unannotated protein. (76 aa)
GCA_001316085_03104Unannotated protein. (80 aa)
GCA_001316085_00673Unannotated protein. (45 aa)
IC006_2737Unannotated protein. (255 aa)
GCA_001316085_00681Unannotated protein. (189 aa)
IC006_2758Unannotated protein. (397 aa)
IC006_2771Unannotated protein. (392 aa)
IC006_0146Unannotated protein. (414 aa)
IC006_1105Unannotated protein. (322 aa)
GCA_001316085_01061Unannotated protein. (41 aa)
GCA_001316085_01062Unannotated protein. (34 aa)
IC006_1116Unannotated protein. (276 aa)
carSUnannotated protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids. (164 aa)
IC006_1281Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (196 aa)
IC006_1304Unannotated protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. (300 aa)
IC006_1306Unannotated protein. (187 aa)
IC006_1364Unannotated protein. (321 aa)
IC006_1372Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
IC006_2555Unannotated protein. (320 aa)
IC006_2556Unannotated protein. (330 aa)
IC006_2596Unannotated protein. (521 aa)
GCA_001316085_01493Unannotated protein. (150 aa)
IC006_2600Unannotated protein. (408 aa)
GCA_001316085_01523Unannotated protein. (109 aa)
IC006_2625Unannotated protein. (188 aa)
IC006_0872Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
IC006_2264Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (271 aa)
IC006_2263Unannotated protein. (409 aa)
IC006_2247Unannotated protein. (296 aa)
IC006_2732Unannotated protein. (288 aa)
IC006_2729Unannotated protein; Belongs to the FPP/GGPP synthase family. (193 aa)
GCA_001316085_00668Unannotated protein. (59 aa)
IC006_2719Unannotated protein. (227 aa)
GCA_001316085_00656Unannotated protein. (90 aa)
mvkUnannotated protein; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (313 aa)
IC006_1566Unannotated protein. (349 aa)
egsAUnannotated protein; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. (351 aa)
IC006_1789Unannotated protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids. (252 aa)
IC006_1798Unannotated protein. (310 aa)
Your Current Organism:
Sulfolobus sp. JCM16833
NCBI taxonomy Id: 1294262
Other names: S. sp. JCM 16833, Sulfolobus sp. DSM 104736, Sulfolobus sp. JCM 16833
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