STRINGSTRING
AHM04355.1 AHM04355.1 AHM04376.1 AHM04376.1 AHM04377.1 AHM04377.1 AHM04986.1 AHM04986.1 AHM04988.1 AHM04988.1 AHM04989.1 AHM04989.1 AHM04990.1 AHM04990.1 AHM05447.1 AHM05447.1 AHM05448.1 AHM05448.1 AHM05449.1 AHM05449.1 AHM05450.1 AHM05450.1 AHM05451.1 AHM05451.1 AHM05516.1 AHM05516.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHM04355.1Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein. (543 aa)
AHM04376.1Peptide/nickel/opine uptake family ABC transporter, permease protein. (336 aa)
AHM04377.1Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein. (559 aa)
AHM04986.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (664 aa)
AHM04988.1Dipeptide transport system permease protein DppC; TC 3.A.1.5.2. (279 aa)
AHM04989.1Oligopeptide/dipeptide ABC transporter, permease protein. (361 aa)
AHM04990.1Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein. (547 aa)
AHM05447.1Putative oligopeptide ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (625 aa)
AHM05448.1Dipeptide transport system permease protein DppB; TC 3.A.1.5.2. (315 aa)
AHM05449.1Dipeptide-binding protein ABC transporter, periplasmic substrate-binding protein component; TC 3.A.1.5.2. (525 aa)
AHM05450.1Major pilin protein fimA. (241 aa)
AHM05451.1Transcriptional regulator, GntR family. (282 aa)
AHM05516.1Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein. (549 aa)
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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