(5 nodes) Mixed, incl. Transmembrane beta strand, and FecCD transport family network (Roseibacterium elongatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AHM03401.1	Hypothetical protein. (603 aa)
	AHM03402.1	Vitamin B12 ABC transporter, B12-binding protein component BtuF. (246 aa)
	AHM03403.1	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (329 aa)
	AHM03404.1	Vitamin B12 ABC transporter, ATPase component BtuD. (252 aa)
	AHM03405.1	Adenosylcobinamide amidohydrolase. (223 aa)

Your Current Organism:

Roseibacterium elongatum

NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHM03401.1	AHM03402.1	roselon_01001	roselon_01002	Hypothetical protein.	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	0.945
AHM03401.1	AHM03403.1	roselon_01001	roselon_01003	Hypothetical protein.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.912
AHM03401.1	AHM03404.1	roselon_01001	roselon_01004	Hypothetical protein.	Vitamin B12 ABC transporter, ATPase component BtuD.	0.912
AHM03401.1	AHM03405.1	roselon_01001	roselon_01005	Hypothetical protein.	Adenosylcobinamide amidohydrolase.	0.882
AHM03402.1	AHM03401.1	roselon_01002	roselon_01001	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	Hypothetical protein.	0.945
AHM03402.1	AHM03403.1	roselon_01002	roselon_01003	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.998
AHM03402.1	AHM03404.1	roselon_01002	roselon_01004	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	Vitamin B12 ABC transporter, ATPase component BtuD.	0.998
AHM03402.1	AHM03405.1	roselon_01002	roselon_01005	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	Adenosylcobinamide amidohydrolase.	0.954
AHM03403.1	AHM03401.1	roselon_01003	roselon_01001	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein.	0.912
AHM03403.1	AHM03402.1	roselon_01003	roselon_01002	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	0.998
AHM03403.1	AHM03404.1	roselon_01003	roselon_01004	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Vitamin B12 ABC transporter, ATPase component BtuD.	0.999
AHM03403.1	AHM03405.1	roselon_01003	roselon_01005	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Adenosylcobinamide amidohydrolase.	0.921
AHM03404.1	AHM03401.1	roselon_01004	roselon_01001	Vitamin B12 ABC transporter, ATPase component BtuD.	Hypothetical protein.	0.912
AHM03404.1	AHM03402.1	roselon_01004	roselon_01002	Vitamin B12 ABC transporter, ATPase component BtuD.	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	0.998
AHM03404.1	AHM03403.1	roselon_01004	roselon_01003	Vitamin B12 ABC transporter, ATPase component BtuD.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
AHM03404.1	AHM03405.1	roselon_01004	roselon_01005	Vitamin B12 ABC transporter, ATPase component BtuD.	Adenosylcobinamide amidohydrolase.	0.939
AHM03405.1	AHM03401.1	roselon_01005	roselon_01001	Adenosylcobinamide amidohydrolase.	Hypothetical protein.	0.882
AHM03405.1	AHM03402.1	roselon_01005	roselon_01002	Adenosylcobinamide amidohydrolase.	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	0.954
AHM03405.1	AHM03403.1	roselon_01005	roselon_01003	Adenosylcobinamide amidohydrolase.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.921
AHM03405.1	AHM03404.1	roselon_01005	roselon_01004	Adenosylcobinamide amidohydrolase.	Vitamin B12 ABC transporter, ATPase component BtuD.	0.939