Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHM02948.1 | AHM03102.1 | roselon_00507 | roselon_00669 | Aminomethyltransferase (glycine cleavage system T protein). | Aminomethyl transferase family protein; Belongs to the GcvT family. | 0.930 |
| AHM02948.1 | AHM05076.1 | roselon_00507 | roselon_02778 | Aminomethyltransferase (glycine cleavage system T protein). | Serine hydroxymethyltransferase. | 0.994 |
| AHM02948.1 | AHM05805.1 | roselon_00507 | roselon_03552 | Aminomethyltransferase (glycine cleavage system T protein). | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.927 |
| AHM02948.1 | fhs | roselon_00507 | roselon_01877 | Aminomethyltransferase (glycine cleavage system T protein). | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.924 |
| AHM02948.1 | folD | roselon_00507 | roselon_03560 | Aminomethyltransferase (glycine cleavage system T protein). | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.935 |
| AHM02948.1 | gcvH | roselon_00507 | roselon_00506 | Aminomethyltransferase (glycine cleavage system T protein). | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| AHM02948.1 | gcvP | roselon_00507 | roselon_00505 | Aminomethyltransferase (glycine cleavage system T protein). | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| AHM02948.1 | glyA | roselon_00507 | roselon_03645 | Aminomethyltransferase (glycine cleavage system T protein). | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.994 |
| AHM02948.1 | purH | roselon_00507 | roselon_00819 | Aminomethyltransferase (glycine cleavage system T protein). | IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.919 |
| AHM02948.1 | purN | roselon_00507 | roselon_03156 | Aminomethyltransferase (glycine cleavage system T protein). | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.914 |
| AHM02948.1 | purQ | roselon_00507 | roselon_02579 | Aminomethyltransferase (glycine cleavage system T protein). | Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ a [...] | 0.813 |
| AHM02948.1 | thyX | roselon_00507 | roselon_00258 | Aminomethyltransferase (glycine cleavage system T protein). | Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.901 |
| AHM03102.1 | AHM02948.1 | roselon_00669 | roselon_00507 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Aminomethyltransferase (glycine cleavage system T protein). | 0.930 |
| AHM03102.1 | AHM05076.1 | roselon_00669 | roselon_02778 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Serine hydroxymethyltransferase. | 0.941 |
| AHM03102.1 | AHM05805.1 | roselon_00669 | roselon_03552 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.929 |
| AHM03102.1 | fhs | roselon_00669 | roselon_01877 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.924 |
| AHM03102.1 | folD | roselon_00669 | roselon_03560 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.929 |
| AHM03102.1 | gcvH | roselon_00669 | roselon_00506 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.995 |
| AHM03102.1 | gcvP | roselon_00669 | roselon_00505 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
| AHM03102.1 | glyA | roselon_00669 | roselon_03645 | Aminomethyl transferase family protein; Belongs to the GcvT family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.941 |
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