(33 nodes) ATP-binding cassette (ABC) transporter complex network (Roseibacterium elongatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ugpE	Glycerol-3-phosphate ABC transporter, permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)
	AHM03411.1	AttE component of AttEFGH ABC transport system. (231 aa)
	AHM03429.1	Lipopolysaccharide ABC transporter, ATP-binding protein LptB. (254 aa)
	AHM03439.1	ABC transporter, permease protein. (273 aa)
	AHM03671.1	Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily. (360 aa)
	lolD	Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (227 aa)
	potA	Maltose/maltodextrin transport ATP-binding protein MalK; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (365 aa)
	AHM04469.1	Manganese ABC transporter, ATP-binding protein SitB. (252 aa)
	znuC	Zinc ABC transporter, ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (257 aa)
	AHM04571.1	Phosphonate ABC transporter permease protein phnE2; TC 3.A.1.9.1. (313 aa)
	AHM04572.1	Phosphonate ABC transporter permease protein phnE1; TC 3.A.1.9.1. (285 aa)
	AHM04614.1	L-proline glycine betaine binding protein ABC transporter protein ProX; TC 3.A.1.12.1. (309 aa)
	AHM04617.1	L-proline glycine betaine ABC transport system permease protein ProV; TC 3.A.1.12.1. (281 aa)
	AHM04660.1	Sugar ABC transporter, ATP-binding protein. (505 aa)
	AHM04820.1	ABC-type transport system; Involved in resistance to organic solvents, permease component. (263 aa)
	AHM05043.1	Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily. (368 aa)
	AHM05351.1	Alpha-glucoside transport system permease protein AglG. (382 aa)
	AHM05441.1	Phosphonate ABC transporter permease protein phnE2; TC 3.A.1.9.1. (269 aa)
	AHM05442.1	Phosphonate ABC transporter permease protein phnE1; TC 3.A.1.9.1. (196 aa)
	AHM05467.1	Putative permease; FIG000988. (379 aa)
	AHM05468.1	Permease YjgP/YjgQ family protein. (364 aa)
	AHM03402.1	Vitamin B12 ABC transporter, B12-binding protein component BtuF. (246 aa)
	AHM03344.1	Hypothetical protein; Structural elements, Cell Exterior, surface polysaccharides/antigen. (272 aa)
	AHM03155.1	Various polyols ABC transporter, permease component 2. (276 aa)
	AHM02864.1	Putative nucleoside ABC transporter, ATP-binding protein component. (512 aa)
	AHM02819.1	Sugar ABC transporter, ATP-binding protein. (506 aa)
	AHM02783.1	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A. (376 aa)
	AHM02611.1	Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (372 aa)
	AHM02492.1	ABC transporter, nucleotide binding protein/ATPase protein. (550 aa)
	AHM02491.1	Transport ATP-binding protein CydD. (564 aa)
	AHM05508.1	ABC-type sugar transport system, permease component. (305 aa)
	AHM03404.1	Vitamin B12 ABC transporter, ATPase component BtuD. (252 aa)
	AHM05830.1	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TC 3.A.1.1.3; Belongs to the ABC transporter superfamily. (371 aa)

Your Current Organism:

Roseibacterium elongatum

NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHM02491.1	AHM02492.1	roselon_00024	roselon_00025	Transport ATP-binding protein CydD.	ABC transporter, nucleotide binding protein/ATPase protein.	0.998
AHM02491.1	AHM03671.1	roselon_00024	roselon_01283	Transport ATP-binding protein CydD.	Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily.	0.585
AHM02492.1	AHM02491.1	roselon_00025	roselon_00024	ABC transporter, nucleotide binding protein/ATPase protein.	Transport ATP-binding protein CydD.	0.998
AHM02611.1	AHM03429.1	roselon_00154	roselon_01030	Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	Lipopolysaccharide ABC transporter, ATP-binding protein LptB.	0.402
AHM02611.1	AHM03671.1	roselon_00154	roselon_01283	Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily.	0.465
AHM02611.1	AHM05043.1	roselon_00154	roselon_02744	Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily.	0.480
AHM02611.1	potA	roselon_00154	roselon_02093	Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	Maltose/maltodextrin transport ATP-binding protein MalK; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.464
AHM02783.1	AHM03429.1	roselon_00337	roselon_01030	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.	Lipopolysaccharide ABC transporter, ATP-binding protein LptB.	0.690
AHM02783.1	AHM04614.1	roselon_00337	roselon_02278	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.	L-proline glycine betaine binding protein ABC transporter protein ProX; TC 3.A.1.12.1.	0.444
AHM02783.1	AHM04820.1	roselon_00337	roselon_02499	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.	ABC-type transport system; Involved in resistance to organic solvents, permease component.	0.941
AHM02783.1	AHM05467.1	roselon_00337	roselon_03204	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.	Putative permease; FIG000988.	0.437
AHM02783.1	AHM05468.1	roselon_00337	roselon_03205	ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.	Permease YjgP/YjgQ family protein.	0.437
AHM02819.1	AHM02864.1	roselon_00374	roselon_00419	Sugar ABC transporter, ATP-binding protein.	Putative nucleoside ABC transporter, ATP-binding protein component.	0.912
AHM02819.1	AHM04660.1	roselon_00374	roselon_02325	Sugar ABC transporter, ATP-binding protein.	Sugar ABC transporter, ATP-binding protein.	0.910
AHM02864.1	AHM02819.1	roselon_00419	roselon_00374	Putative nucleoside ABC transporter, ATP-binding protein component.	Sugar ABC transporter, ATP-binding protein.	0.912
AHM02864.1	AHM04660.1	roselon_00419	roselon_02325	Putative nucleoside ABC transporter, ATP-binding protein component.	Sugar ABC transporter, ATP-binding protein.	0.908
AHM03155.1	AHM05830.1	roselon_00730	roselon_03583	Various polyols ABC transporter, permease component 2.	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TC 3.A.1.1.3; Belongs to the ABC transporter superfamily.	0.865
AHM03402.1	AHM03404.1	roselon_01002	roselon_01004	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	Vitamin B12 ABC transporter, ATPase component BtuD.	0.998
AHM03404.1	AHM03402.1	roselon_01004	roselon_01002	Vitamin B12 ABC transporter, ATPase component BtuD.	Vitamin B12 ABC transporter, B12-binding protein component BtuF.	0.998
AHM03404.1	AHM03411.1	roselon_01004	roselon_01011	Vitamin B12 ABC transporter, ATPase component BtuD.	AttE component of AttEFGH ABC transport system.	0.477