STRINGSTRING
AGN25420.1 AGN25420.1 AGY50150.1 AGY50150.1 AGN25567.1 AGN25567.1 AGN25568.1 AGN25568.1 AGN25592.1 AGN25592.1 AGN25677.1 AGN25677.1 AGN25810.1 AGN25810.1 secY secY AGN25838.1 AGN25838.1 AGN25929.1 AGN25929.1 AGN25934.1 AGN25934.1 rps27e rps27e AGN25939.1 AGN25939.1 AGN26437.1 AGN26437.1 AGN26463.1 AGN26463.1 AGN26472.1 AGN26472.1 AGN26717.1 AGN26717.1 AGN26887.1 AGN26887.1 secE secE AGN27036.1 AGN27036.1 AGN27041.1 AGN27041.1 AGN27094.1 AGN27094.1 AGN27097.1 AGN27097.1 AGN27100.1 AGN27100.1 AGY50230.1 AGY50230.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGN25420.1COG0681 Signal peptidase I. (266 aa)
AGY50150.1COG0681 Signal peptidase I. (266 aa)
AGN25567.1RPA associated protein; COG3390 Uncharacterized protein conserved in archaea. (321 aa)
AGN25568.1COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. (447 aa)
AGN25592.1Hypothetical protein. (142 aa)
AGN25677.1Putative single-stranded-DNA-specific exonuclease; COG0608 Single-stranded DNA-specific exonuclease. (459 aa)
AGN25810.1Hypothetical protein; COG1244 Predicted Fe-S oxidoreductase. (331 aa)
secYPreprotein translocase SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (490 aa)
AGN25838.1COG1422 Predicted membrane protein. (211 aa)
AGN25929.1COG0343 Queuine/archaeosine tRNA-ribosyltransferase. (536 aa)
AGN25934.1Transcriptional regulator, TrmB; COG4738 Predicted transcriptional regulator. (123 aa)
rps27eCOG2051 Ribosomal protein S27E. (59 aa)
AGN25939.1COG2047 Uncharacterized protein (ATP-grasp superfamily). (255 aa)
AGN26437.1Putative phosphoserine phosphatase; COG1340 Uncharacterized archaeal coiled-coil protein. (290 aa)
AGN26463.1Hypothetical protein. (195 aa)
AGN26472.1COG0750 Predicted membrane-associated Zn-dependent proteases 1. (531 aa)
AGN26717.1Hypothetical protein. (124 aa)
AGN26887.1Phosphoesterase domain-containing protein; COG0608 Single-stranded DNA-specific exonuclease. (492 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (73 aa)
AGN27036.1COG3388 Uncharacterized protein conserved in archaea. (104 aa)
AGN27041.1Hypothetical protein. (87 aa)
AGN27094.1COG3612 Uncharacterized protein conserved in archaea. (156 aa)
AGN27097.1COG1412 Uncharacterized proteins of PilT N-term./Vapc superfamily. (116 aa)
AGN27100.1DNA replication complex protein GINS 51; COG1711 Uncharacterized protein conserved in archaea. (264 aa)
AGY50230.1Hypothetical protein; COG1831 Predicted metal-dependent hydrolase (urease superfamily). (279 aa)
Your Current Organism:
Methanomassiliicoccus intestinalis
NCBI taxonomy Id: 1295009
Other names: C. Methanomassiliicoccus intestinalis Issoire-Mx1, Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
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