Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGN25442.1 | AGN26885.1 | MMINT_00260 | MMINT_15780 | Putative ATP-dependent helicase; COG1201 Lhr-like helicases. | Putative phosphoesterase, SbcD/Mre11-related protein; COG1407 Predicted ICC-like phosphoesterases. | 0.499 |
| AGN25442.1 | radA | MMINT_00260 | MMINT_05940 | Putative ATP-dependent helicase; COG1201 Lhr-like helicases. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.492 |
| AGN25442.1 | radB | MMINT_00260 | MMINT_05420 | Putative ATP-dependent helicase; COG1201 Lhr-like helicases. | DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.420 |
| AGN25502.1 | AGN26885.1 | MMINT_00920 | MMINT_15780 | COG1201 Lhr-like helicases. | Putative phosphoesterase, SbcD/Mre11-related protein; COG1407 Predicted ICC-like phosphoesterases. | 0.478 |
| AGN25502.1 | radA | MMINT_00920 | MMINT_05940 | COG1201 Lhr-like helicases. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.414 |
| AGN25502.1 | radB | MMINT_00920 | MMINT_05420 | COG1201 Lhr-like helicases. | DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.420 |
| AGN25546.1 | msrA | MMINT_01430 | MMINT_00800 | Hypothetical protein; COG3467 Predicted flavin-nucleotide-binding protein. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.669 |
| AGN25568.1 | AGN25908.1 | MMINT_01650 | MMINT_05280 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | Hef nuclease; COG1111 ERCC4-like helicases. | 0.755 |
| AGN25568.1 | AGN26000.1 | MMINT_01650 | MMINT_06270 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | SMC domain-containing protein; COG0419 ATPase involved in DNA repair. | 0.612 |
| AGN25568.1 | AGN26001.1 | MMINT_01650 | MMINT_06280 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | DNA double-strand break repair protein; COG0420 DNA repair exonuclease. | 0.693 |
| AGN25568.1 | AGN26274.1 | MMINT_01650 | MMINT_09150 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | Hypothetical protein. | 0.693 |
| AGN25568.1 | AGN26430.1 | MMINT_01650 | MMINT_10880 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | PHP domain-containing protein; COG1796 DNA polymerase IV (family X). | 0.409 |
| AGN25568.1 | AGN26516.1 | MMINT_01650 | MMINT_11830 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | Hypothetical protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component. | 0.612 |
| AGN25568.1 | fen | MMINT_01650 | MMINT_12970 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | Flap structure-specific endonuclease FEN-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision [...] | 0.613 |
| AGN25568.1 | lig | MMINT_01650 | MMINT_05290 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.546 |
| AGN25568.1 | radA | MMINT_01650 | MMINT_05940 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.764 |
| AGN25568.1 | radB | MMINT_01650 | MMINT_05420 | COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins. | DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.757 |
| AGN25596.1 | msrA | MMINT_01940 | MMINT_00800 | Uracil-DNA glycosylase, family 4; COG1573 Uracil-DNA glycosylase. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.616 |
| AGN25644.1 | AGN26000.1 | MMINT_02420 | MMINT_06270 | COG0350 Methylated DNA-protein cysteine methyltransferase. | SMC domain-containing protein; COG0419 ATPase involved in DNA repair. | 0.421 |
| AGN25644.1 | AGN26001.1 | MMINT_02420 | MMINT_06280 | COG0350 Methylated DNA-protein cysteine methyltransferase. | DNA double-strand break repair protein; COG0420 DNA repair exonuclease. | 0.661 |
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