(11 nodes) Cobalamin (vitamin B12)-binding domain network (Methanomassiliicoccus intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGN25599.1	Radical SAM domain protein; COG1032 Fe-S oxidoreductase. (573 aa)
	AGN25680.1	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain. (288 aa)
	AGN25710.1	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (262 aa)
	AGY50158.1	5-methyltetrahydrofolate--homocysteine methyltransferase; COG5012 Predicted cobalamin binding protein. (216 aa)
	AGY50164.1	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (250 aa)
	AGN26247.1	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (218 aa)
	AGN26253.1	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (213 aa)
	AGN26257.1	Trimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (216 aa)
	AGN26262.1	Dimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein. (214 aa)
	AGN26836.1	Radical SAM domain-containing protein; COG1032 Fe-S oxidoreductase. (464 aa)
	AGN26884.1	COG5012 Predicted cobalamin binding protein. (214 aa)

Your Current Organism:

Methanomassiliicoccus intestinalis

NCBI taxonomy Id: 1295009
Other names: C. Methanomassiliicoccus intestinalis Issoire-Mx1, Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGN25680.1	AGN25710.1	MMINT_02810	MMINT_03150	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.901
AGN25680.1	AGN26247.1	MMINT_02810	MMINT_08880	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.700
AGN25680.1	AGN26253.1	MMINT_02810	MMINT_08940	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.691
AGN25680.1	AGN26257.1	MMINT_02810	MMINT_09000	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Trimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.701
AGN25680.1	AGN26262.1	MMINT_02810	MMINT_09030	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Dimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.711
AGN25680.1	AGY50164.1	MMINT_02810	MMINT_05930	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.902
AGN25710.1	AGN25680.1	MMINT_03150	MMINT_02810	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	0.901
AGN25710.1	AGN26247.1	MMINT_03150	MMINT_08880	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.708
AGN25710.1	AGN26253.1	MMINT_03150	MMINT_08940	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.693
AGN25710.1	AGN26257.1	MMINT_03150	MMINT_09000	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Trimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.701
AGN25710.1	AGN26262.1	MMINT_03150	MMINT_09030	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Dimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.714
AGN25710.1	AGY50164.1	MMINT_03150	MMINT_05930	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.902
AGN26247.1	AGN25680.1	MMINT_08880	MMINT_02810	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	0.700
AGN26247.1	AGN25710.1	MMINT_08880	MMINT_03150	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.708
AGN26247.1	AGN26253.1	MMINT_08880	MMINT_08940	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.902
AGN26247.1	AGN26257.1	MMINT_08880	MMINT_09000	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Trimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.906
AGN26247.1	AGN26262.1	MMINT_08880	MMINT_09030	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Dimethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.910
AGN26247.1	AGY50164.1	MMINT_08880	MMINT_05930	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.694
AGN26253.1	AGN25680.1	MMINT_08940	MMINT_02810	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG1410 Methionine synthase I, cobalamin-binding domain.	0.691
AGN26253.1	AGN25710.1	MMINT_08940	MMINT_03150	Monomethylamine methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	Methanol methyltransferase corrinoid protein; COG5012 Predicted cobalamin binding protein.	0.693