(26 nodes) ERAD pathway, and AAA ATPase, AAA+ lid domain network (Cryptococcus amylolentus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L202_08233	Uncharacterized protein. (845 aa)
	L202_07986	Uncharacterized protein. (787 aa)
	L202_08149	Uncharacterized protein. (324 aa)
	L202_07527	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (235 aa)
	L202_07013	Uncharacterized protein. (422 aa)
	L202_07033	Uncharacterized protein. (714 aa)
	L202_07452	OTU domain-containing protein. (326 aa)
	L202_06329	Uncharacterized protein. (520 aa)
	L202_05261	ANK_REP_REGION domain-containing protein. (1516 aa)
	L202_05402	TGc domain-containing protein. (627 aa)
	L202_05527	AAA domain-containing protein. (1121 aa)
	L202_05563	RING-type domain-containing protein. (750 aa)
	L202_04811	Josephin domain-containing protein. (390 aa)
	L202_04451	UBX domain-containing protein. (295 aa)
	L202_03314	Uncharacterized protein. (487 aa)
	L202_03409	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (810 aa)
	L202_03499	PRKCSH domain-containing protein. (521 aa)
	L202_03407	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (268 aa)
	L202_02751	U-box domain-containing protein. (1160 aa)
	L202_03199	UAS domain-containing protein. (539 aa)
	L202_02178	AAA domain-containing protein; Belongs to the AAA ATPase family. (371 aa)
	L202_01136	Uncharacterized protein. (745 aa)
	L202_01156	Uncharacterized protein. (876 aa)
	L202_01316	RING-type domain-containing protein. (559 aa)
	L202_01748	Uncharacterized protein. (792 aa)
	L202_00491	Nuclear protein localization protein 4. (681 aa)

Your Current Organism:

Cryptococcus amylolentus

NCBI taxonomy Id: 1295533
Other names: C. amylolentus CBS 6039, Cryptococcus amylolentus CBS 6039, Cryptococcus amylolentus CBS6039

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L202_00491	L202_01136	A0A1E3I7M3	A0A1E3I2Z2	Nuclear protein localization protein 4.	Uncharacterized protein.	0.895
L202_00491	L202_01156	A0A1E3I7M3	A0A1E3I3F9	Nuclear protein localization protein 4.	Uncharacterized protein.	0.653
L202_00491	L202_01748	A0A1E3I7M3	A0A1E3I4Y0	Nuclear protein localization protein 4.	Uncharacterized protein.	0.972
L202_00491	L202_02178	A0A1E3I7M3	A0A1E3HZM8	Nuclear protein localization protein 4.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.844
L202_00491	L202_02751	A0A1E3I7M3	A0A1E3HW46	Nuclear protein localization protein 4.	U-box domain-containing protein.	0.955
L202_00491	L202_03199	A0A1E3I7M3	A0A1E3HZD9	Nuclear protein localization protein 4.	UAS domain-containing protein.	0.944
L202_00491	L202_03314	A0A1E3I7M3	A0A1E3HSL0	Nuclear protein localization protein 4.	Uncharacterized protein.	0.999
L202_00491	L202_03407	A0A1E3I7M3	A0A1E3HUJ5	Nuclear protein localization protein 4.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.952
L202_00491	L202_03409	A0A1E3I7M3	A0A1E3HST2	Nuclear protein localization protein 4.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.998
L202_00491	L202_03499	A0A1E3I7M3	A0A1E3HT90	Nuclear protein localization protein 4.	PRKCSH domain-containing protein.	0.525
L202_00491	L202_04451	A0A1E3I7M3	A0A1E3HRD5	Nuclear protein localization protein 4.	UBX domain-containing protein.	0.935
L202_00491	L202_05261	A0A1E3I7M3	A0A1E3HJT8	Nuclear protein localization protein 4.	ANK_REP_REGION domain-containing protein.	0.449
L202_00491	L202_05527	A0A1E3I7M3	A0A1E3HKV3	Nuclear protein localization protein 4.	AAA domain-containing protein.	0.843
L202_00491	L202_05563	A0A1E3I7M3	A0A1E3HKX9	Nuclear protein localization protein 4.	RING-type domain-containing protein.	0.774
L202_00491	L202_06329	A0A1E3I7M3	A0A1E3HFJ2	Nuclear protein localization protein 4.	Uncharacterized protein.	0.851
L202_00491	L202_07013	A0A1E3I7M3	A0A1E3HEA8	Nuclear protein localization protein 4.	Uncharacterized protein.	0.927
L202_00491	L202_07452	A0A1E3I7M3	A0A1E3HEU0	Nuclear protein localization protein 4.	OTU domain-containing protein.	0.961
L202_00491	L202_07527	A0A1E3I7M3	A0A1E3HCI7	Nuclear protein localization protein 4.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.958
L202_00491	L202_08149	A0A1E3I7M3	A0A1E3HB81	Nuclear protein localization protein 4.	Uncharacterized protein.	0.508
L202_00491	L202_08233	A0A1E3I7M3	A0A1E3H8Y6	Nuclear protein localization protein 4.	Uncharacterized protein.	0.927