(27 nodes) Ubiquitin-like protein binding network (Cryptococcus amylolentus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L202_00455	Uncharacterized protein. (539 aa)
	L202_08233	Uncharacterized protein. (845 aa)
	L202_07416	UBA domain-containing protein. (911 aa)
	L202_07013	Uncharacterized protein. (422 aa)
	L202_06329	Uncharacterized protein. (520 aa)
	L202_07657	WD_REPEATS_REGION domain-containing protein. (1228 aa)
	L202_06442	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (275 aa)
	L202_06826	Uncharacterized protein. (1170 aa)
	L202_06597	Uncharacterized protein. (505 aa)
	L202_05433	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (149 aa)
	L202_05460	Uncharacterized protein. (647 aa)
	L202_05479	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (100 aa)
	L202_05489	Uncharacterized protein. (773 aa)
	L202_04918	WD_REPEATS_REGION domain-containing protein. (366 aa)
	L202_04207	WD_REPEATS_REGION domain-containing protein. (336 aa)
	L202_04342	Uncharacterized protein. (747 aa)
	L202_04133	RPN13_C domain-containing protein. (293 aa)
	L202_03314	Uncharacterized protein. (487 aa)
	L202_03733	GLUE N-terminal domain-containing protein. (542 aa)
	L202_02939	CUE domain-containing protein. (198 aa)
	L202_03199	UAS domain-containing protein. (539 aa)
	L202_02151	Smr domain-containing protein. (721 aa)
	L202_01101	UV excision repair protein Rad23. (377 aa)
	L202_01614	Uncharacterized protein. (722 aa)
	L202_00491	Nuclear protein localization protein 4. (681 aa)
	L202_01139	CUE domain-containing protein. (478 aa)
	L202_00410	NOT2_3_5 domain-containing protein. (429 aa)

Your Current Organism:

Cryptococcus amylolentus

NCBI taxonomy Id: 1295533
Other names: C. amylolentus CBS 6039, Cryptococcus amylolentus CBS 6039, Cryptococcus amylolentus CBS6039

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L202_00455	L202_01101	A0A1E3I7E2	A0A1E3I2U9	Uncharacterized protein.	UV excision repair protein Rad23.	0.720
L202_00455	L202_03733	A0A1E3I7E2	A0A1E3HU05	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.958
L202_00455	L202_04342	A0A1E3I7E2	A0A1E3HR34	Uncharacterized protein.	Uncharacterized protein.	0.984
L202_00455	L202_05460	A0A1E3I7E2	A0A1E3HKJ8	Uncharacterized protein.	Uncharacterized protein.	0.942
L202_00491	L202_01101	A0A1E3I7M3	A0A1E3I2U9	Nuclear protein localization protein 4.	UV excision repair protein Rad23.	0.851
L202_00491	L202_03199	A0A1E3I7M3	A0A1E3HZD9	Nuclear protein localization protein 4.	UAS domain-containing protein.	0.944
L202_00491	L202_03314	A0A1E3I7M3	A0A1E3HSL0	Nuclear protein localization protein 4.	Uncharacterized protein.	0.999
L202_00491	L202_06329	A0A1E3I7M3	A0A1E3HFJ2	Nuclear protein localization protein 4.	Uncharacterized protein.	0.851
L202_00491	L202_07013	A0A1E3I7M3	A0A1E3HEA8	Nuclear protein localization protein 4.	Uncharacterized protein.	0.927
L202_00491	L202_07657	A0A1E3I7M3	A0A1E3HFK6	Nuclear protein localization protein 4.	WD_REPEATS_REGION domain-containing protein.	0.648
L202_00491	L202_08233	A0A1E3I7M3	A0A1E3H8Y6	Nuclear protein localization protein 4.	Uncharacterized protein.	0.927
L202_01101	L202_00455	A0A1E3I2U9	A0A1E3I7E2	UV excision repair protein Rad23.	Uncharacterized protein.	0.720
L202_01101	L202_00491	A0A1E3I2U9	A0A1E3I7M3	UV excision repair protein Rad23.	Nuclear protein localization protein 4.	0.851
L202_01101	L202_01139	A0A1E3I2U9	A0A1E3I4W6	UV excision repair protein Rad23.	CUE domain-containing protein.	0.410
L202_01101	L202_01614	A0A1E3I2U9	A0A1E3I4M4	UV excision repair protein Rad23.	Uncharacterized protein.	0.429
L202_01101	L202_03199	A0A1E3I2U9	A0A1E3HZD9	UV excision repair protein Rad23.	UAS domain-containing protein.	0.419
L202_01101	L202_03314	A0A1E3I2U9	A0A1E3HSL0	UV excision repair protein Rad23.	Uncharacterized protein.	0.825
L202_01101	L202_03733	A0A1E3I2U9	A0A1E3HU05	UV excision repair protein Rad23.	GLUE N-terminal domain-containing protein.	0.696
L202_01101	L202_04133	A0A1E3I2U9	A0A1E3HS40	UV excision repair protein Rad23.	RPN13_C domain-containing protein.	0.815
L202_01101	L202_04207	A0A1E3I2U9	A0A1E3HQG1	UV excision repair protein Rad23.	WD_REPEATS_REGION domain-containing protein.	0.598