(24 nodes) Regulation of protein catabolic process network (Cryptococcus amylolentus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	L202_08316	PA28_beta domain-containing protein. (294 aa)
	L202_08293	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (450 aa)
	L202_08149	Uncharacterized protein. (324 aa)
	L202_07918	Peptidyl-tRNA hydrolase. (208 aa)
	L202_07402	P4Hc domain-containing protein. (675 aa)
	L202_07027	Nefa_Nip30_N domain-containing protein. (219 aa)
	L202_06670	Uncharacterized protein. (393 aa)
	L202_04666	Ubiquitin carboxyl-terminal hydrolase. (483 aa)
	L202_04680	WD_REPEATS_REGION domain-containing protein. (695 aa)
	L202_04935	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (997 aa)
	L202_05002	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family. (467 aa)
	L202_04046	PITH domain-containing protein. (220 aa)
	L202_04264	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
	L202_04449	Uncharacterized protein. (177 aa)
	L202_03596	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (398 aa)
	L202_03854	PCI domain-containing protein. (541 aa)
	L202_01877	WD_REPEATS_REGION domain-containing protein. (529 aa)
	L202_01962	RBR-type E3 ubiquitin transferase. (524 aa)
	L202_02537	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1000 aa)
	L202_01406	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family. (414 aa)
	L202_00222	PITH domain-containing protein. (246 aa)
	L202_00490	RBR-type E3 ubiquitin transferase. (574 aa)
	L202_00617	Uncharacterized protein. (306 aa)
	L202_00901	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (407 aa)

Your Current Organism:

Cryptococcus amylolentus

NCBI taxonomy Id: 1295533
Other names: C. amylolentus CBS 6039, Cryptococcus amylolentus CBS 6039, Cryptococcus amylolentus CBS6039

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L202_00490	L202_00617	A0A1E3I776	A0A1E3I7P9	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.595
L202_00490	L202_01962	A0A1E3I776	A0A1E3HYV4	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.679
L202_00617	L202_00490	A0A1E3I7P9	A0A1E3I776	Uncharacterized protein.	RBR-type E3 ubiquitin transferase.	0.595
L202_00901	L202_01406	A0A1E3I8N4	A0A1E3I3Q4	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	0.999
L202_00901	L202_01877	A0A1E3I8N4	A0A1E3HYU3	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	WD_REPEATS_REGION domain-containing protein.	0.643
L202_00901	L202_02537	A0A1E3I8N4	A0A1E3I0X9	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
L202_00901	L202_03596	A0A1E3I8N4	A0A1E3HTG8	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
L202_00901	L202_03854	A0A1E3I8N4	A0A1E3HUH4	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.997
L202_00901	L202_04264	A0A1E3I8N4	A0A1E3HTA3	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
L202_00901	L202_04666	A0A1E3I8N4	A0A1E3HMB1	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	Ubiquitin carboxyl-terminal hydrolase.	0.996
L202_00901	L202_04680	A0A1E3I8N4	A0A1E3HME1	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	WD_REPEATS_REGION domain-containing protein.	0.643
L202_00901	L202_04935	A0A1E3I8N4	A0A1E3HNA8	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
L202_00901	L202_05002	A0A1E3I8N4	A0A1E3HP23	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.	0.999
L202_00901	L202_08293	A0A1E3I8N4	A0A1E3HAS6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
L202_00901	L202_08316	A0A1E3I8N4	A0A1E3H9A5	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	PA28_beta domain-containing protein.	0.868
L202_01406	L202_00901	A0A1E3I3Q4	A0A1E3I8N4	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.999
L202_01406	L202_01877	A0A1E3I3Q4	A0A1E3HYU3	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	WD_REPEATS_REGION domain-containing protein.	0.633
L202_01406	L202_02537	A0A1E3I3Q4	A0A1E3I0X9	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
L202_01406	L202_03596	A0A1E3I3Q4	A0A1E3HTG8	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
L202_01406	L202_03854	A0A1E3I3Q4	A0A1E3HUH4	26S protease regulatory subunit 6B, variant; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.998