(11 nodes) MicroRNA (miRNA) biogenesis network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158N9Q0	DRBM domain-containing protein. (650 aa)
	A0A158NC49	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1979 aa)
	A0A158NDW6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1608 aa)
	A0A158NGM1	Uncharacterized protein; Belongs to the argonaute family. (1193 aa)
	A0A158NIK6	Uncharacterized protein. (1328 aa)
	A0A158NKG1	Uncharacterized protein. (391 aa)
	A0A158NTB7	Uncharacterized protein. (1848 aa)
	A0A158NWI3	PAZ domain-containing protein. (548 aa)
	A0A158NXG3	Piwi domain-containing protein. (213 aa)
	A0A158P273	Uncharacterized protein. (1215 aa)
	A0A158P2F5	Uncharacterized protein. (336 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158N9Q0	A0A158NC49	DRBM domain-containing protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.790
A0A158N9Q0	A0A158NDW6	DRBM domain-containing protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.790
A0A158N9Q0	A0A158NIK6	DRBM domain-containing protein.	Uncharacterized protein.	0.990
A0A158N9Q0	A0A158NKG1	DRBM domain-containing protein.	Uncharacterized protein.	0.611
A0A158N9Q0	A0A158NWI3	DRBM domain-containing protein.	PAZ domain-containing protein.	0.410
A0A158N9Q0	A0A158NXG3	DRBM domain-containing protein.	Piwi domain-containing protein.	0.410
A0A158N9Q0	A0A158P273	DRBM domain-containing protein.	Uncharacterized protein.	0.711
A0A158NC49	A0A158N9Q0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	DRBM domain-containing protein.	0.790
A0A158NC49	A0A158NGM1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.729
A0A158NC49	A0A158NIK6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.489
A0A158NC49	A0A158NKG1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.986
A0A158NC49	A0A158NWI3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	PAZ domain-containing protein.	0.830
A0A158NC49	A0A158NXG3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Piwi domain-containing protein.	0.830
A0A158NC49	A0A158P273	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.505
A0A158NC49	A0A158P2F5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.856
A0A158NDW6	A0A158N9Q0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	DRBM domain-containing protein.	0.790
A0A158NDW6	A0A158NGM1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.729
A0A158NDW6	A0A158NIK6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.489
A0A158NDW6	A0A158NKG1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.943
A0A158NDW6	A0A158NWI3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	PAZ domain-containing protein.	0.800