(8 nodes) Integrator complex network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158N920	Uncharacterized protein. (961 aa)
	A0A158NEM5	Uncharacterized protein. (1085 aa)
	A0A158NK46	Uncharacterized protein. (929 aa)
	A0A158NK72	DUF3677 domain-containing protein. (2074 aa)
	A0A158NMG2	Beta-Casp domain-containing protein. (662 aa)
	A0A158NPM6	Uncharacterized protein. (1113 aa)
	A0A158P276	Uncharacterized protein. (595 aa)
	A0A158P3V2	Uncharacterized protein. (917 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158N920	A0A158NEM5	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158N920	A0A158NK46	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A158N920	A0A158NK72	Uncharacterized protein.	DUF3677 domain-containing protein.	0.999
A0A158N920	A0A158NMG2	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.977
A0A158N920	A0A158NPM6	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A158N920	A0A158P276	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A158N920	A0A158P3V2	Uncharacterized protein.	Uncharacterized protein.	0.980
A0A158NEM5	A0A158N920	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158NEM5	A0A158NK46	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158NEM5	A0A158NK72	Uncharacterized protein.	DUF3677 domain-containing protein.	0.996
A0A158NEM5	A0A158NMG2	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.996
A0A158NEM5	A0A158NPM6	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A158NEM5	A0A158P276	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158NEM5	A0A158P3V2	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158NK46	A0A158N920	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A158NK46	A0A158NEM5	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A158NK46	A0A158NK72	Uncharacterized protein.	DUF3677 domain-containing protein.	0.999
A0A158NK46	A0A158NMG2	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.999
A0A158NK46	A0A158NPM6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A158NK46	A0A158P276	Uncharacterized protein.	Uncharacterized protein.	0.998