(23 nodes) Focal adhesion, and Alpha-catenin network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158N9Q5	Tyrosine-protein kinase. (521 aa)
	A0A158NA50	PH domain-containing protein. (673 aa)
	A0A158NB51	Uncharacterized protein. (449 aa)
	A0A158NCZ2	Uncharacterized protein. (879 aa)
	A0A158NCZ8	Uncharacterized protein. (1654 aa)
	A0A158NFR1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1653 aa)
	A0A158NG42	Uncharacterized protein. (284 aa)
	A0A158NGA8	Uncharacterized protein. (803 aa)
	A0A158NHX8	Uncharacterized protein. (575 aa)
	A0A158NID0	SH3 domain-containing protein. (688 aa)
	A0A158NM60	Integrin beta; Belongs to the integrin beta chain family. (853 aa)
	A0A158NMD3	Uncharacterized protein. (840 aa)
	A0A158NN08	Uncharacterized protein. (956 aa)
	A0A158NNS7	Uncharacterized protein. (2950 aa)
	A0A158NQA0	Uncharacterized protein. (365 aa)
	A0A158NTB1	MR_MLE domain-containing protein. (363 aa)
	A0A158NYB0	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1816 aa)
	A0A158NZ32	Uncharacterized protein. (2935 aa)
	A0A158NZW2	Uncharacterized protein. (1460 aa)
	A0A158P0U8	PID domain-containing protein. (626 aa)
	A0A158P2M7	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1066 aa)
	A0A158P364	Uncharacterized protein. (540 aa)
	A0A158P3B5	Uncharacterized protein. (267 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158N9Q5	A0A158NHX8	Tyrosine-protein kinase.	Uncharacterized protein.	0.885
A0A158N9Q5	A0A158NID0	Tyrosine-protein kinase.	SH3 domain-containing protein.	0.775
A0A158N9Q5	A0A158NM60	Tyrosine-protein kinase.	Integrin beta; Belongs to the integrin beta chain family.	0.405
A0A158N9Q5	A0A158NN08	Tyrosine-protein kinase.	Uncharacterized protein.	0.724
A0A158N9Q5	A0A158NYB0	Tyrosine-protein kinase.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.848
A0A158N9Q5	A0A158NZ32	Tyrosine-protein kinase.	Uncharacterized protein.	0.704
A0A158NA50	A0A158NB51	PH domain-containing protein.	Uncharacterized protein.	0.903
A0A158NA50	A0A158NCZ2	PH domain-containing protein.	Uncharacterized protein.	0.670
A0A158NA50	A0A158NGA8	PH domain-containing protein.	Uncharacterized protein.	0.507
A0A158NA50	A0A158NHX8	PH domain-containing protein.	Uncharacterized protein.	0.698
A0A158NA50	A0A158NM60	PH domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.537
A0A158NA50	A0A158NN08	PH domain-containing protein.	Uncharacterized protein.	0.651
A0A158NA50	A0A158NNS7	PH domain-containing protein.	Uncharacterized protein.	0.524
A0A158NA50	A0A158NQA0	PH domain-containing protein.	Uncharacterized protein.	0.768
A0A158NA50	A0A158NZ32	PH domain-containing protein.	Uncharacterized protein.	0.646
A0A158NA50	A0A158NZW2	PH domain-containing protein.	Uncharacterized protein.	0.528
A0A158NA50	A0A158P364	PH domain-containing protein.	Uncharacterized protein.	0.784
A0A158NA50	A0A158P3B5	PH domain-containing protein.	Uncharacterized protein.	0.761
A0A158NB51	A0A158NA50	Uncharacterized protein.	PH domain-containing protein.	0.903
A0A158NB51	A0A158NCZ8	Uncharacterized protein.	Uncharacterized protein.	0.484