(43 nodes) Positive regulation of translation network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NQQ2	MIF4G domain-containing protein. (445 aa)
	A0A158NNV4	Uncharacterized protein. (154 aa)
	A0A158P241	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
	A0A158P240	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
	A0A158P232	Smg4_UPF3 domain-containing protein. (596 aa)
	A0A158P1X3	Uncharacterized protein; Belongs to the DEAD box helicase family. (450 aa)
	A0A158P049	TP_methylase domain-containing protein. (285 aa)
	A0A158NYA4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1399 aa)
	A0A158NME9	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	A0A158NM53	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	A0A158NLN9	Uncharacterized protein. (206 aa)
	A0A158NKQ2	MIF4G domain-containing protein. (517 aa)
	A0A158NY26	HTH La-type RNA-binding domain-containing protein. (1399 aa)
	A0A158NXT4	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (654 aa)
	A0A158NWU5	Uncharacterized protein. (1374 aa)
	A0A158NV68	HTH La-type RNA-binding domain-containing protein. (851 aa)
	A0A158NSI6	Lactamase_B domain-containing protein. (808 aa)
	A0A158NUQ4	Uncharacterized protein. (634 aa)
	A0A158NUL6	RPOL4c domain-containing protein. (128 aa)
	A0A158NTW8	Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. (335 aa)
	A0A158P347	Uncharacterized protein. (371 aa)
	A0A158P360	Uncharacterized protein. (364 aa)
	A0A158P3F0	RRM domain-containing protein. (890 aa)
	A0A158NTR9	SAM-dependent MTase TRM10-type domain-containing protein. (426 aa)
	A0A158NTJ7	WW domain-containing protein. (298 aa)
	A0A158NT34	Tr-type G domain-containing protein. (473 aa)
	A0A158NSL7	3'-5' exonuclease domain-containing protein. (612 aa)
	A0A158P2S5	Uncharacterized protein. (440 aa)
	A0A158NS89	KH domain-containing protein. (513 aa)
	A0A158NQY7	Uncharacterized protein. (1239 aa)
	A0A158N9P2	Uncharacterized protein. (401 aa)
	A0A158ND26	Uncharacterized protein. (461 aa)
	A0A158ND92	Uncharacterized protein. (742 aa)
	A0A158NEM2	Eukaryotic translation initiation factor 5A. (160 aa)
	A0A158NF69	Uncharacterized protein. (454 aa)
	A0A158NF70	Uncharacterized protein. (259 aa)
	A0A158NFU5	PUM-HD domain-containing protein. (1269 aa)
	A0A158NG74	Uncharacterized protein. (180 aa)
	A0A158NH27	Uncharacterized protein. (657 aa)
	A0A158NHH3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1080 aa)
	A0A158NIJ2	JmjC domain-containing protein. (419 aa)
	A0A158NJN1	Uncharacterized protein. (372 aa)
	A0A158NJW4	KH domain-containing protein. (568 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158ND92	A0A158NUQ4	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A158NEM2	A0A158NH27	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.551
A0A158NEM2	A0A158NM53	Eukaryotic translation initiation factor 5A.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.759
A0A158NEM2	A0A158NME9	Eukaryotic translation initiation factor 5A.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.992
A0A158NEM2	A0A158NT34	Eukaryotic translation initiation factor 5A.	Tr-type G domain-containing protein.	0.788
A0A158NEM2	A0A158NXT4	Eukaryotic translation initiation factor 5A.	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.741
A0A158NEM2	A0A158NYA4	Eukaryotic translation initiation factor 5A.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.503
A0A158NFU5	A0A158NY26	PUM-HD domain-containing protein.	HTH La-type RNA-binding domain-containing protein.	0.551
A0A158NFU5	A0A158P3F0	PUM-HD domain-containing protein.	RRM domain-containing protein.	0.459
A0A158NH27	A0A158NEM2	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.551
A0A158NH27	A0A158NME9	Uncharacterized protein.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.563
A0A158NH27	A0A158NT34	Uncharacterized protein.	Tr-type G domain-containing protein.	0.691
A0A158NH27	A0A158NXT4	Uncharacterized protein.	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.405
A0A158NHH3	A0A158NLN9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.525
A0A158NKQ2	A0A158NT34	MIF4G domain-containing protein.	Tr-type G domain-containing protein.	0.515
A0A158NKQ2	A0A158NY26	MIF4G domain-containing protein.	HTH La-type RNA-binding domain-containing protein.	0.450
A0A158NKQ2	A0A158P240	MIF4G domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.978
A0A158NKQ2	A0A158P241	MIF4G domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.978
A0A158NLN9	A0A158NHH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.525
A0A158NM53	A0A158NEM2	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Eukaryotic translation initiation factor 5A.	0.759