(33 nodes) Nuclear speck network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NLV7	Uncharacterized protein. (839 aa)
	A0A158NUD6	Uncharacterized protein. (587 aa)
	A0A158NSH5	SFM domain-containing protein. (357 aa)
	A0A158NRC2	Uncharacterized protein. (339 aa)
	A0A158NR91	Btz domain-containing protein. (799 aa)
	A0A158NPW5	Uncharacterized protein. (234 aa)
	A0A158NPC2	Uncharacterized protein. (616 aa)
	A0A158NN61	Uncharacterized protein. (377 aa)
	A0A158NMQ6	Uncharacterized protein. (510 aa)
	A0A158NLK3	RRM domain-containing protein. (175 aa)
	A0A158NJ72	MI domain-containing protein. (849 aa)
	A0A158NIF9	Uncharacterized protein. (475 aa)
	A0A158NIA2	CBF domain-containing protein. (514 aa)
	A0A158NGE1	RRM domain-containing protein. (911 aa)
	A0A158NFM3	C2H2-type domain-containing protein. (565 aa)
	A0A158NF35	Uncharacterized protein. (335 aa)
	A0A158NF24	RRM domain-containing protein. (424 aa)
	A0A158NDV2	WD_REPEATS_REGION domain-containing protein. (523 aa)
	A0A158NBV2	Uncharacterized protein. (292 aa)
	A0A158NB81	Uncharacterized protein. (248 aa)
	A0A158NB25	Uncharacterized protein. (443 aa)
	A0A158NA90	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (362 aa)
	A0A158NVE1	RRM domain-containing protein. (777 aa)
	A0A158NVV9	TFIIS N-terminal domain-containing protein. (886 aa)
	A0A158NVY3	DRBM domain-containing protein. (536 aa)
	A0A158NW58	FHA domain-containing protein. (342 aa)
	A0A158NX28	RRM domain-containing protein. (191 aa)
	A0A158NY23	Uncharacterized protein. (937 aa)
	A0A158P1E8	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (166 aa)
	A0A158P1I7	Uncharacterized protein. (3089 aa)
	A0A158P1L8	SAP domain-containing protein. (222 aa)
	A0A158P3T8	Uncharacterized protein. (301 aa)
	A0A158P477	Uncharacterized protein. (374 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NB25	A0A158NB81	Uncharacterized protein.	Uncharacterized protein.	0.862
A0A158NB25	A0A158NLK3	Uncharacterized protein.	RRM domain-containing protein.	0.770
A0A158NB25	A0A158P477	Uncharacterized protein.	Uncharacterized protein.	0.662
A0A158NB81	A0A158NB25	Uncharacterized protein.	Uncharacterized protein.	0.862
A0A158NB81	A0A158NF24	Uncharacterized protein.	RRM domain-containing protein.	0.611
A0A158NB81	A0A158NLK3	Uncharacterized protein.	RRM domain-containing protein.	0.971
A0A158NB81	A0A158NR91	Uncharacterized protein.	Btz domain-containing protein.	0.482
A0A158NB81	A0A158NVE1	Uncharacterized protein.	RRM domain-containing protein.	0.764
A0A158NB81	A0A158P1E8	Uncharacterized protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.976
A0A158NB81	A0A158P1L8	Uncharacterized protein.	SAP domain-containing protein.	0.530
A0A158NB81	A0A158P477	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A158NBV2	A0A158NF35	Uncharacterized protein.	Uncharacterized protein.	0.903
A0A158NBV2	A0A158NRC2	Uncharacterized protein.	Uncharacterized protein.	0.903
A0A158NBV2	A0A158P477	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A158NDV2	A0A158NFM3	WD_REPEATS_REGION domain-containing protein.	C2H2-type domain-containing protein.	0.415
A0A158NDV2	A0A158NMQ6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.484
A0A158NF24	A0A158NB81	RRM domain-containing protein.	Uncharacterized protein.	0.611
A0A158NF24	A0A158NLK3	RRM domain-containing protein.	RRM domain-containing protein.	0.604
A0A158NF24	A0A158NMQ6	RRM domain-containing protein.	Uncharacterized protein.	0.464
A0A158NF24	A0A158NN61	RRM domain-containing protein.	Uncharacterized protein.	0.545